Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_4044
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Entry
SPUCDC_4044 CDS
T02824
Symbol
rtcR
Name
(GenBank) transcriptional regulatory protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
sega
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Brite
KEGG Orthology (KO) [BR:
sega00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sega03000
]
SPUCDC_4044 (rtcR)
Transcription factors [BR:
sega03000
]
Prokaryotic type
Other transcription factors
Others
SPUCDC_4044 (rtcR)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
AAA_30
AAA_14
AAA_7
AAA_33
ATPase_2
AAA_19
T2SSE
MCM
TsaE
AAA_18
AAA_2
Motif
Other DBs
NCBI-ProteinID:
AGU66786
LinkDB
All DBs
Position
complement(4105803..4107386)
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AA seq
527 aa
AA seq
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MRKTVAFGFVGTVLDYAGRGSQRWEKWRPTLCLCQQDTLVVHRLELLYDARSRSLFEGLK
KDIASVSPETEVVGVEIAIRNPWDFEEVYACLHDFARSHTFHPEDEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLAQTSPPRKKDKPHSTGDVTIIDLDLSRYNDIATRFAQEREETLN
FLKSGIATRNPCFNRMIEQIERVAIRSRSPILLNGPTGAGKSFLARRIYELKLARHQFSG
PFVEVNCATLRGDTAMSALFGHVKGAFTGAREERAGLLRSADGGMLFLDEVGELGADEQA
MLLKTIEEKRFYPFGSDQQVSSDFQLIAGTVRDLRQRVAEGTFREDLYARINLWTFELPG
LRQRQEDIEPNLDYELERHAALTGDSVRFNTEARRAWLSFATSPQAAWRGNFRELSASVT
RMATLADNGRITVETVDDEIARLRYSWNDHRPSALDGLPGIDATALDLFDRMQLENVVAI
CRQAKTLSDAGRQLFNVSRQGKATVNDADRLRKYLARFGLTWDVLQN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaacggtggcctttggttttgtcggcacggtgctcgactatgcaggacgcggc
agtcagcgttgggaaaaatggcgccctactttgtgtctgtgtcagcaggatacgctggtc
gttcaccgcctggaactgctgtacgatgcccgctctcgctcgctgtttgaaggattaaag
aaggatatcgccagcgtctcgccggaaacggaagtcgtcggcgtagaaatcgcgatccgc
aacccgtgggacttcgaagaggtttacgcctgcctgcacgatttcgcccgcagccatacc
tttcatcccgaagatgaagactatctgattcatatcaccaccggcacccacgtcgcgcag
atctgctggttcctgctggcggaggcgcgctatctaccggcgcgattagcgcagacctcg
ccgccgcgcaaaaaagataaaccgcatagcacgggcgacgtgacgattattgacctcgac
ctcagccgctacaatgacatcgccacccgcttcgcccaggagcgggaggagacgctcaac
ttcctgaagtccggcattgcaacccgcaacccgtgtttcaaccggatgattgagcaaatt
gagcgcgtcgcgatacgctcccgttcgccaatcctgctcaacggcccgaccggcgcgggc
aagtcgtttctcgcccgtcgcatctatgaactaaaactggcccgccaccagttcagcggc
ccgtttgtcgaagtgaactgcgccaccctgcgcggcgacacggcgatgtcggcgctgttc
ggccacgttaagggggcgtttaccggtgcgagagaggagcgtgcaggactgctgcgcagc
gccgacggcggcatgctgtttcttgacgaagtgggagaactgggcgcggatgaacaggcc
atgttgctgaaaaccattgaagagaaacgcttttaccctttcggcagcgaccagcaggtc
agcagcgatttccagttgattgccggcacggtgcgcgacctgcgccagcgagtggcggag
gggacattccgcgaagacctgtacgcgcgcattaatctctggaccttcgaactaccgggc
ctgcgtcagcgccaggaagatattgaaccaaaccttgactacgaactggaacgccacgcg
gcgctaaccggcgacagcgtgcgttttaataccgaagcgcgccgcgcctggctgagcttc
gccacctcgccgcaggccgcctggcgcggtaacttccgcgaactctccgccagcgtcacc
cgcatggcgacgctagcggacaacgggcgaatcacggtcgaaacggtagacgatgaaatc
gcgcgtttgcgctatagctggaatgaccatcgcccctccgcgctcgacggattgccgggc
attgacgcaacggcgctggatctgtttgaccgtatgcaactggaaaacgtcgttgccatc
tgccgccaggcgaaaaccctttccgacgccgggcggcagctattcaacgtttcccgtcag
gggaaagccacggtgaatgacgctgaccggctgcgtaagtacctggcgcgttttgggctg
acgtgggacgttttacagaattaa
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