Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_4239
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Entry
SPUCDC_4239 CDS
T02824
Name
(GenBank) large repetitive protein
Organism
sega
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
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Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_2
Big_3_3
DUF4625
Y_Y_Y
Big_3_4
Glucodextran_B
GspA_SrpA_N
PKD
He_PIG
DUF7743
PKD_4
Borrelia_P83
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
AGU66976
LinkDB
All DBs
Position
4291905..4299767
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AA seq
2620 aa
AA seq
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MGNKSIQKFFADQNSVIDLSSLGNAKGAKVSLSGPDMNITTPRGSVIIVNGALYSSIKGN
NLAVKFKDKTITGAKILGSVDLKDIQLERIDSSLVDSAQVEKKGNGKRRNKKEEEELKKQ
LDDAENAKKEADKAKEEAEKAKEAAEKALNEAFEVQNSSKQIEEMLQNFLADNVAKDNLA
QQSDASQQNTQAKATQASKQNDAEKVLPQPINKNTSTGKSNSSKNEENKLDAESVKEPLK
VTLALAAESNSGSKDDSITNFTKPQFVGSTAPNATVIIKINGIAVGQAVADSLGNFTFTA
PETLTDGTYNLEAEAKTADGSGSAKLVITIDSVTDKPTFELSPESSVSGHKGLTPTLTPS
IVGTAEENAKVDIYVDNKLVASVDVDKDGNWSYEFKDNELSEGENSIKVVAVDKAGNKNE
TTDSIITDTIPPEKPTIELDDSSDSGIKNDNITNSTLPTFIGVAEPGSTVSIYLGLKHLG
EVIVAKDGTWSYTLTTPLKDGEYNITATATDIAGHTSATANLPFTIDTRISYFSAEIETT
NDSGIVGDNVTNNTRPTFTGKTEPNAIISVINSETGEEVIFKANDKGEWTFNFTSDSVEG
INNLTFTVEDVAGNKKDFSFSYVIDTIAPVPPTVSLEDFVVLPNGIILSGNDLPALVGTA
EPKSTILLMRDGKLYDSIEVDSNGTWNYQFSNKFLQGAYDIEIISQDAAGNKSSTVKYSF
TIQTEVVPPKAELDASDDSGAKGDWITNKHNALTLLGTADRFATVNILIDGKTIGVTTAD
ADGNWNFDISRNLSDNVYKITVESIDPLGRTSSVDYQLTIDSFTPIPTVMLHDSADSGVK
GDMITKINTPLFTGMAEANAKVSIYVDGVLSGEAIAGDDGVWNFQFTTALSDGSHDVTVK
VEDIAGNTASSSAYNFQIVTQTQKPTIELVNDTGVDNTDHIINEKNPALTGTAAPYSTVK
LYIDGALIAEVRTNKDGRWEYTLKADQGLVDGDHRITASVEDIAGNIAHSDPFLISVDTA
ISIPIVSLSPDSDSGIADDNLTNIVKPTLHLKDIDPDIISVQVWDAMSDTQIGVATQQPD
GSWAYTFTSDLTEGLHQVYVKVEDIAGNKANSAVFDFTIDTTVSTPVISLLSKDDTGVTG
DNLTNINKPGFAISGVDADAHRVVVQVMHNGVSEEIELSHLNGSWLFTPGNTWADGSYTL
TVKVEDKAGNTSYSAPLTVVIDTQIAIDGVELVNDSGVKGDNMTNDDRPHFRVTVPTDVN
EVRLSIDGGNSWVQATPGVAGSWEYIWPTDLADGQYTLTVEATDKAGNTVTKTIDFAVDT
TLSVPVIVLNSADDTGVQGDNMTNRTQPTFALQHIDDDAVRVTVSVEHGGVTTTFDATKG
TGGWTFTPPTSWADGDYTLSVSVEDKAGNTSHSASLTVTVDTQIAINNIELVNDSGIPDD
NLTNNVRPHFQVTVPTDVNVVRLSIDGGKTWFNATQSATPGAWDYIWPDDVADGGYTLTV
EATDKAGNKTTQELDFTIDTTLSVPTLSLDSADDSGIAGDNITNVKTPGFTLNNIDTDVS
RVIVEVMHNGIKQEVPLVQTGGQWRFAPTSDWADGDYILTVKVEDRAGNVKQSAPLTVTV
DTHIAIDRIELVNDSGIPGDNLTNEARPHFQVTVPADVNGVRLSIDGGKTWFDATQSATS
GVWDYTWLTNVANGPHTLMVEASDKAGNKTTQKLDFIIDTLLSEPTITLDSADDSAAGDN
ITNVKMPGFTLGNIDADVTKVVVTVAHDGKNQQIELIKNGGVWRFTPGAAWTDGDYTLTV
KVEDKAGNTNYSAPLTVTIDTQTSIDRIELLNDTGIVGDNLTNEARPQFHITVPTDVNSV
QLSLDGGINWVNATLTSDGVWEYIWPTDLVENTYTLTVKATDVAGNTATETLNFIIDTTL
STPTITLDSADDSGTANDNKTNVKTPGFIIGGIDSDVTQVVVQVMRDGHSEEVELTQTNG
QWRFVPGSAWTDGDYTLTVTVKDEAGNIRHSAPLTVTIDTQITIDHIELVNDSGIPDDNL
TNNVRPHFQVTVPTDVNVVRLSIDGGKTWFNATQSATPGVWDYTWLADVGEGKHTLTVEA
TDKAGNKTTQQLDFIIDTLLSEPTIVLDSTDDSGTKGDNLTNVNKPTFLLGNIDADARYV
TVEVQHGGTKEVLTATKDATGNWSVTPTGTWADGDYTLTVRVEDEAGNEKHSASLTVTVD
TQITIDVIELVNDNGIPGDNMTNDAHPQFRVTVPGDVNEVSLSIDGGVTWVKATQSATPG
VWNYTWPGTVPDGDYTLNVKATDNAGNTVTETLHFTIDTTLSVPVIVLNSADDTSVQGDN
MTNRTQPTFALQHIDDDAVRVTVSVEHGGVTTTFDATKGTGGWTFTPPTSWNDGTYTLSV
TVVDRAGNSQQSASLAVTVDSTVTVTADSQHDDASDDATATAVTPPESETVNAESATHLR
TVPSAAEESVVKETAYSITLLNADSGDEIDRSISQTPSFEISVPENIVNVSIMFEGEEFT
LPITNQKAIFEVPLSLEDGEYTMDVKFIDKDNDFLIKEKTFSVDHSSADIVNAMNARGKT
EDDINDSPSTSSVGHNNNGAIDVFAVNEVTLPVDNQEEHA
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaaagcatacaaaagttttttgccgatcaaaattctgtaattgatttatct
tctttgggtaatgccaaaggcgcaaaagtttctctttccgggccagacatgaacattacc
acgccgcgtggttcagtgatcattgtcaatggcgctctttattcaagtatcaaaggcaat
aacctcgctgttaaatttaaagataagactattaccggcgctaaaattctgggcagcgta
gatttaaaagatattcaactggagagaattgacagctcattggttgattctgctcaggta
gaaaagaaaggtaatggcaaacgacgaaataagaaggaagaagaggaattaaaaaagcag
cttgacgatgctgaaaacgcaaagaaagaagctgataaggcgaaggaagaagcagagaaa
gctaaggaggctgcagaaaaagcgctcaatgaagcgtttgaagtacagaactcgtcaaag
caaattgaagaaatgctgcagaactttttggctgacaatgtagcaaaagacaatctggct
cagcaaagcgatgcttcccagcaaaatacacaggctaaagcaacgcaggcttctaaacag
aacgatgctgaaaaagttcttcctcaacctattaataaaaataccagtactggcaaaagt
aatagcagtaaaaatgaggaaaataagctcgatgccgagtctgttaaagagccgcttaaa
gtcacattagcgcttgcggccgagagtaacagcggtagcaaagatgatagtataactaat
tttaccaaacctcagtttgtaggtagcactgctcccaatgccacggttattattaaaatt
aatggtattgctgtcggtcaggctgtagcggatagtttgggtaacttcacctttacagcg
cctgaaacattgactgatggaacatataatctggaggcagaggccaagactgctgatggg
agcggtagcgccaaacttgtcattactatcgattccgttaccgataaaccaacatttgaa
ctttcgcctgaaagtagtgtgtccggtcataagggcttaacgccgaccttgacgccttca
attgttggtacggcggaagagaatgctaaggttgacatttatgtagataataaactggtt
gccagcgttgatgtcgataaagatggaaactggagttatgaatttaaggataatgaatta
tctgagggcgaaaatagtataaaagtcgttgctgtagataaagcaggtaataaaaacgaa
acgacggatagtatcataaccgacaccattcctccggaaaagccgacgattgagctggat
gatagtagtgattccggcattaaaaatgacaacattacaaatagcaccctgccaacattt
attggtgtggcggaacccggttctacagtctctatttatcttggacttaaacatcttggt
gaggtcattgttgctaaagatgggacatggagctatacgcttactacgccgctcaaggat
ggcgaatacaatataacagcaacagctactgatattgccgggcatacctcagcgacggca
aatctgccttttactattgatacacgtatcagctatttcagcgctgagattgaaacgacg
aatgatagcggtattgtcggagataacgttactaacaatactcgcccaacctttacaggt
aaaactgagccaaatgctattatcagtgtcataaatagtgagactggcgaagaggttatt
tttaaagcgaatgacaagggcgaatggacgttcaatttcacttccgactcagtggaaggg
attaacaatcttacgttcactgttgaagatgtcgctggcaacaaaaaggatttttccttt
agttacgttatcgatactattgcccctgtacctccgacggtttctttggaggactttgtt
gttttaccgaatggtataattttatcagggaatgatttaccggctttagtcggtacggca
gagccaaagtctaccatcttattgatgcgagatggtaaattatatgacagcattgaggtt
gactcaaacgggacctggaattatcagtttagtaataaatttcttcagggcgcctatgat
attgaaatcatctctcaggatgccgccggtaataaatcctctactgttaaatattctttt
actattcaaactgaagttgtacctccaaaagcggaactcgatgccagtgatgattccggt
gcaaaaggcgactggattaccaataaacataatgctctgacattactgggaacagctgat
aggtttgctaccgtaaatatccttatcgatggtaaaacgataggcgtgacgactgcggat
gcagacggtaactggaattttgatatttcccgaaatctgtctgacaatgtttataagatt
acggttgaatccatcgatcctttaggaagaacgtcatctgtagattatcagcttaccatt
gatagctttacgccgatccctactgttatgttgcatgatagcgctgattctggcgttaaa
ggcgatatgattactaaaattaatacgccgttgtttaccgggatggctgaagctaatgct
aaggtttccatctatgttgacggtgtgttaagtggtgaggctattgctggcgatgatggt
gtatggaattttcaatttaccacagcgttatccgatggctcgcatgacgtaacggtaaaa
gtagaagatattgccggtaatactgcctcctcatcagcgtataatttccaaatcgtaacg
caaacgcaaaaaccaacaatagagttggtcaacgatacgggggttgataatacagaccat
attattaatgaaaagaatcctgcactgacaggaaccgctgcaccctattcaacggttaaa
ctctatattgatggcgcactgatcgctgaggtcagaacaaataaagatggcagatgggag
tataccctgaaagccgatcaaggtttggttgatggcgatcatagaataaccgcttcagtt
gaagatatcgctggcaacattgcccattcggatcctttcttaattagcgtcgatactgct
atttcaataccgatagtttcattgagcccggattcagattcgggaattgcagatgataat
ttaacgaatatcgttaaacctaccttgcacctaaaagatattgatccggacattatcagt
gttcaggtatgggatgccatgtctgatacgcagatcggtgttgccacgcaacaacctgat
ggttcatgggcctatacctttacttcagatttaacggaaggcttgcatcaggtttatgtc
aaggttgaggacattgcgggtaataaagcgaacagtgcggtattcgattttactatcgat
accacagtatcaacgccggtgatttccctgctttctaaggatgatacgggggttacaggc
gataacctgaccaatatcaataagccaggttttgctatttccggtgttgatgccgatgcg
catcgggtcgtcgtacaggtgatgcataatggcgtgagcgaagagatcgaactttcccac
ctcaatggtagttggttatttacaccagggaatacgtgggcggatggcagctacacgtta
acggtgaaagtagaagataaggcaggaaataccagctattcagcgccgctgacggtcgtt
atcgatacccaaatcgccattgatggggtggaactggtcaacgatagcggtgtgaaaggc
gacaatatgaccaacgacgaccgtccccactttcgtgtgacggtacctacggatgtcaat
gaagtccgtctgagcattgacggtggtaattcgtgggttcaggcaaccccgggcgtggca
ggcagctgggagtatatctggccgacagacctggcagatggtcaatacacgctaacggtg
gaggcgactgataaagcaggcaataccgtgacgaagaccatcgatttcgcggtggatacc
acgctgtcagtgccggtcatcgtactgaatagcgcggacgataccggtgtccagggcgat
aacatgacgaatcgcacccagccgacatttgccctgcagcatattgatgatgatgccgtt
cgcgttacggtcagcgtggagcatggcggcgtcaccaccacatttgacgccacgaaaggc
acaggcggatggacctttacgccgccgacatcatgggcggatggtgattataccctgagt
gtgtcagtcgaagataaagcggggaacaccagccattctgcatcgctgacggtgacggtg
gacacgcaaatcgccattaataacattgaactggtcaatgacagcggtattcccgacgat
aatctgactaataacgtgcgtccgcacttccaggtgacggtaccgacggatgtcaacgtg
gtgcgcctgagcattgacggcggcaagacgtggttcaacgctacccagagcgcgacgccg
ggcgcctgggattatatctggccggatgatgtggccgacggaggctataccctgacggta
gaggcgaccgacaaggcgggaaacaagacgacgcaggaacttgatttcaccatcgatacc
actctgtctgtgccgaccctctcgctggacagcgcagatgacagcggcatcgcgggcgat
aatatcaccaatgttaaaacgccgggctttaccctcaacaatattgataccgatgtcagc
cgggtgatagtggaggtaatgcacaatggcattaaacaggaggtgccactggttcagacc
ggcgggcagtggcgctttgcgccgaccagcgactgggcggacggcgactatatcctgacg
gtgaaggtagaagatagggccggaaatgtgaagcagtccgcgccgttgacggtgacagta
gacacgcatatcgccattgaccgtattgaactggttaacgacagcggtatccccggcgat
aatctgaccaatgaagcgcgcccgcactttcaggtgacagtaccggcggatgttaacggt
gtaagactgagtattgatggcggcaaaacgtggtttgacgccacgcagagcgcgacgtcg
ggcgtctgggattacacctggctgacgaatgtggctaacggccctcacaccctgatggtg
gaagcgtccgacaaggcgggaaacaaaacgacgcagaaactggacttcatcatcgatacc
ctgctgtcagaaccgactattaccctggacagcgcggatgatagcgccgctggcgataac
atcaccaacgttaagatgccaggctttaccctcggtaatatcgacgccgacgtgaccaaa
gtggtggtgacggtggcgcatgatggtaagaaccaacagatagagttgattaagaacggc
ggtgtgtggcgctttacgccgggcgcagcctggaccgatggagactatacgttgacggta
aaggtagaagataaggcgggtaatacaaattattctgcgccgctgacggtgactatcgat
acgcaaacgtctattgatcgcattgagcttcttaatgacacgggtattgtcggggataac
ctgaccaatgaagcacgtccacagtttcatattacggtaccgacggacgtgaactctgtg
caactgagtcttgatggcggcatcaactgggttaacgcaacgctgacgtctgacggcgtt
tgggagtatatatggccgacagatctggtcgaaaatacgtataccctgacagtgaaagca
accgatgttgcaggcaacacggcgacggaaacgctcaattttatcattgataccacattg
tcgacaccgaccatcacgctggatagcgcagatgatagcggcaccgccaacgataataag
actaacgttaaaacgccgggttttattatcggcggtattgattctgacgtgactcaggtc
gtcgtgcaggtgatgcgcgatggtcacagcgaggaggtggagctgacgcagactaacggg
cagtggcgttttgtacccggcagcgcgtggactgatggcgactatacgctgacggtaacg
gtgaaagatgaggcgggtaatattcgccactcagcgccgttgacggtcaccatcgatacg
caaatcaccattgaccatattgaactggtcaatgacagcggtattcccgacgataatctg
actaataatgtgcgtccgcacttccaggtgacggtaccgacggatgtcaacgtggtgcgc
ctgagcattgacggcggtaagacgtggttcaacgctacccagagcgcgacgccgggcgtc
tgggattatacctggctggctgatgtgggagagggtaagcataccctgacagtggaggcg
accgacaaggcgggaaacaaaacgacgcagcaactggacttcatcatcgataccctactg
tcagaaccgactatcgtgctggacagcacggacgacagcggaacaaaaggcgataacctg
accaacgtaaataagccgacgtttttactgggcaatattgacgcagacgcgcggtatgtc
acggttgaggtacagcatggcggcacgaaagaggtgctgacggccaccaaagacgcgacc
ggcaactggagcgtaacaccgaccggcacatgggcagatggcgactatacgctgacagtg
agggtggaagatgaggcggggaacgaaaaacactcagcgtcgctaacggtcactgttgat
acccaaatcaccattgatgttattgaactggttaatgataacggtattcccggcgacaat
atgactaacgacgcccatccgcagttccgcgtgacggtaccgggggacgttaacgaagtt
agtctgagcattgacggtggcgtgacctgggttaaggcgacacagagcgcgacgccgggc
gtctggaattatacctggccgggcaccgtgccggatggcgactatacgctgaatgtgaaa
gcgactgacaatgcgggtaatacggtgacggagacactccacttcactattgataccacg
ctgtcagtgccggtcatcgtactgaatagcgcggacgataccagtgtccagggcgataac
atgacgaatcgcacccagccgacatttgccctgcagcatattgatgatgatgccgttcgc
gttacggtcagcgtggagcatggcggcgtcaccaccacatttgacgccacgaaaggcaca
ggcggatggacctttacgccgccgacatcatggaatgatggtacctacacgctgagcgtg
acggtggtggatcgcgcggggaactcacagcaatctgcttcgctagcggtgacggttgac
tcaacggtgacggtaacagcggatagccagcatgacgatgcgagcgatgacgccacggca
acagcggttactccaccggagtctgaaacagtgaatgccgaaagcgctacgcatcttcgt
acagtgccgtctgcggcggaagaaagcgtggtgaaggagacagcctatagtattacattg
ttaaacgctgactctggggatgaaatagatcgttcaattagtcagacaccttcttttgaa
atatcagtacctgagaatattgttaatgtcagtattatgtttgaaggagaagagtttact
ctgccgataactaaccagaaagcaatattcgaagttccgctatctttggaagatggtgaa
tatactatggacgtgaaattcattgataaagacaatgatttcctgattaaggagaaaaca
ttctcagtcgatcactcctcggcggatattgtgaacgcaatgaatgcaagaggaaagacc
gaggatgatattaatgattccccttccacgagttctgtagggcacaacaataacggcgct
attgatgttttcgccgttaatgaagttacgctacctgtagataatcaagaagaacacgca
taa
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integrated database retrieval system
