Salmonella enterica subsp. enterica serovar Heidelberg SL476: SeHA_C0103
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Entry
SeHA_C0103 CDS
T00738
Symbol
rapA
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
seh
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Brite
KEGG Orthology (KO) [BR:
seh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seh03021
]
SeHA_C0103 (rapA)
Transcription machinery [BR:
seh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SeHA_C0103 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_1_RapA
DEAD
Cas3-like_C_2
GT_PLOD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACF66171
LinkDB
All DBs
Position
complement(105402..108236)
Genome browser
AA seq
944 aa
AA seq
DB search
MDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHEGWQLHIDEVKEENGLLVYV
GTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPY
SGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVL
IIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQ
RLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLLLTATPEQLGMESH
FARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEP
LLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQY
QTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQ
KVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSE
IGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
YHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEETDGFDDLIKSCREQHEALKAQLEQG
RDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAMNLFDIVGINQDDRGDNLIVLTPSD
HMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLL
KNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQ
LSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSARALIDNARREADEKLSGELSRLEAL
RAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDALRLIVVTHQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcgaaccgtcaccttacttttcccgtccacgggggaaaaccgcctgtatgcg
cgcagtgattctcccgtgacccgcgtcatgttcaaccctggcgatacgattacaagccat
gaaggctggcagctacatatcgatgaagtaaaagaagaaaatggcctgcttgtttatgtc
ggcacccgcctggataccgaagagaccaatgtgacgttgcgcgaagttctgctcgacagc
aagttggttttcagtaagccccaggatcgtctgttcgccggtcaaatcgatcgaatggat
cggttcgcgctgcgctatcgcgcccgtaaatttcagagcgagcagtaccggatgccatac
agcggtctgcgcggtcagcggaccaatctgatcccgcatcagcttaatatcgctcatgat
gtaggtcgtcgccacgcgccgcgcgtactgctggcggatgaagtgggcttaggtaaaacc
attgaagccgggatgattctgcatcaacagttattatccggcgcggcggaacgcgtattg
atcatcgttccggaaaccctgcaacaccagtggctggtagaaatgctgcgccgtttcaac
ctgcgcttcgcgctgttcgatgacgaacgctataccgaagcgcagcacgacgcgtataac
ccgtttgaaaccgaacaactggtgatctgctcgctggatttcgcccgccgtaataagcag
cgtctggaacatttgtgcgacgccgagtgggatctgctggtggtcgacgaagcgcatcat
ctggtgtggagtaccgatgcgccgagccgtgaatatatggccatcgaacagttagctgaa
cgcgtaccgggcgtgctgctgctgaccgccacgccagaacagctggggatggaaagccat
ttcgcccgtctgcgcctgctggatccgaaccgtttccacgatttcgaacagtttgtcgaa
gaacagaaaaactaccgacctgtcgccgatgcggtggccatgctgctggcgggcaataaa
ctcagcaacgacgaactgaacaggctgggcgatctgatcggcgaacaggatattgaaccg
ctgttgcaggccgctaatagcgatcgcgacgatgcgcaggccgcccgtgatgagctggtg
tcgatgctgatggatcgccacggcaccagccgcgttctgttccgcaacacccgtaacggc
gtcaaggggttcccgaaacgtgaactgcatacggtaaaactgccgctgccgacccagtat
cagaccgccattaaggtctccggcattatgggcgcgcgtaaaagcgcggaagatcgcgcc
cgcgatatgctctatccggaacaaatttatcaggagttcgaaggcgataccggcacctgg
tggaacttcgacccacgcgttgagtggctaatgggctatctgaccagccatcgttcgcaa
aaagtgctggtgatctgcgccaaagcgaccaccgcgttacagctggagcaggtgctgcgc
gaacgcgaaggcatccgcgccgccgtgttccatgagggcatgtcgattatcgaacgcgac
cgcgccgccgcctggttcgccgaagaagataccggcgcgcaggtgctgttatgttccgaa
atcggctccgaaggacgtaacttccagtttgccagcaatctggtgatgttcgacttgccg
tttaacccggatctgctggaacagcgtattggtcgtctggatcgcatcggccaggcgcat
gatatccagatccacgtcccgtacctggaaaaaaccgcccagtcggtgctggttcgctgg
tatcacgaagggctggacgcctttgagcacacctgtccaaccggccgcgcgatttatgat
tcagcctacgccagtctgattaactatctggccgcgcctgaagaaaccgacgggtttgac
gatctgatcaaatcctgccgcgagcaacatgaagcgctaaaagcccagttagaacagggc
cgcgaccgcctgctggagatccactccaacggtggtgaaaaagcccaacagcttgcacaa
agcattgaagaacaggacgacgacaccaacctgattgcgttcgccatgaacctgttcgat
atcgtcggcattaaccaggacgatcgcggcgacaacctgatcgtgctgacgccgtccgac
cacatgttggtgccggatttccccggcctgccggaagacggctgtactatcacgtttgaa
cgtgacgtagccctgtctcgcgaagatgcgcagtttattacctgggaacatccgctcatc
cgtaacggactggatctgatcctctccggcgacaccggcagcagcaccatttcgctgttg
aaaaataaagcgctgcccgtcggcacgctgctggtcgaactggtttacgtcgtggaagcg
caggcgccgaaacagctacaactgaaccgcttcctgccgccgacgccggtacgtatgctg
ttagataaaaacggcaacaatctggccgcccaggtcgagtttgaaaccttcaaccgccag
ctcagcgccgtgaatcgccacaccggtagcaaactggtgaacgccgttcaacaggacgtc
cacgccattttgcaactgggcgagacgcagattgaaaagtccgccagagcgctgattgat
aacgcgcgccgcgaggcggatgaaaaactgtccggggaactgtcgcgtctggaagcgctg
cgcgccgtcaacccgaacattcgcgacgacgaacttgccgctatcgacagcaaccgtcag
caggtgctggaaagcctgaatcaggcaggctggcgtctggacgcgctgcgtcttatcgtc
gtcacgcaccaataa
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