Salmonella enterica subsp. enterica serovar Heidelberg SL476: SeHA_C0621
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Entry
SeHA_C0621 CDS
T00738
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
seh
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Brite
KEGG Orthology (KO) [BR:
seh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seh03016
]
SeHA_C0621 (ybbB)
Enzymes [BR:
seh01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
SeHA_C0621 (ybbB)
Transfer RNA biogenesis [BR:
seh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SeHA_C0621 (ybbB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_SelU
Rhodanese
nSTAND6
T2SSE
AAA_16
Zeta_toxin
AAA_22
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACF70373
UniProt:
B4T9K6
LinkDB
All DBs
Position
complement(620934..622028)
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AA seq
364 aa
AA seq
DB search
MQDRQKAQDYRALLLADTPLIDVRAPIEFEQGAMPGAINLPLMMDDERAAVGTCYKRQGA
DAALALGHRLVCGDIRQQRLEAWKAAYQRFPNGYLCCARGGQRSHIVQRWLQETGIDCPL
IEGGYKALRQTAIQATWQLAQKPILLIGGCTGSGKTQLVRQQPNGVDLEGLARHRGSSFG
RTLNPQLSQASFENKLAVELLKINARQTLKRWVLEDEGRTIGANHLPECLRERMAQAPIA
VVEDPFALRLERLREEYFICMHHDFTHAYGDEAGWQAYSEYLHHGLFAIRRRLGLQRFAE
LTDTLDRALAEQLSSGSTDGHMAWLVPLLNEYYDPMYRYQLEKKAANIVFRGPWQDVANW
LKAQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacagacaaaaagcacaggactatcgcgcgctcctccttgccgatacgccttta
attgatgtacgcgcgccgattgagtttgaacagggcgccatgccgggcgctatcaacctg
ccattgatgatggatgacgagcgggccgccgtcggcacctgctacaaacgtcagggcgcg
gatgcggcgttagcgttggggcatcggctggtttgcggcgacattcgccagcagcggctt
gaggcctggaaagccgcgtatcaacgtttccccaacgggtatctgtgctgcgcgcgcggc
ggtcagcggtcacatatcgtacaacgttggctgcaagaaacagggattgactgcccgctt
attgaaggcggctataaagcgctgcgccagacagcaattcaggcgacctggcaactggcg
caaaaaccgatacttttaattggcggctgtacgggcagcggcaaaacgcaactggtgcga
caacagcccaacggcgtggatctggaaggtctcgcgcgtcatcgcggctcctcttttggc
cgcacgctgaacccccagctcagccaggccagttttgaaaacaaacttgccgttgaattg
ctgaaaattaacgcgcgtcagacgctaaaaaggtgggtactggaagatgaagggcgaacg
atcggcgccaaccatctgcctgagtgtttacgcgaaagaatggcgcaggcccccattgcg
gtagtggaagatccgtttgcgcttcgtctggaacgactgcgtgaagagtatttcatctgt
atgcatcacgacttcacccacgcctacggcgatgaagccggttggcaggcgtatagtgaa
tatcttcatcatggactgttcgctattcgccgccgtctggggttgcaacgctttgccgaa
ctgacggacacgctggatagggcgctggcagagcaattatccagcggcagcaccgacggc
catatggcatggctggttccgctacttaacgaatattacgacccaatgtatcgctatcaa
ctggagaaaaaagccgcgaatatcgtttttcgcggcccatggcaagacgttgccaactgg
ctaaaagcgcaatag
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integrated database retrieval system
