Salmonella enterica subsp. enterica serovar Heidelberg SL476: SeHA_C2291
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Entry
SeHA_C2291 CDS
T00738
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
seh
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Pathway
seh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SeHA_C2291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seh03400
]
SeHA_C2291
Enzymes [BR:
seh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
SeHA_C2291
DNA repair and recombination proteins [BR:
seh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SeHA_C2291
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SeHA_C2291
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SeHA_C2291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACF69105
UniProt:
A0A6C6ZPN0
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All DBs
Position
2191880..2193310
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AA seq
476 aa
AA seq
DB search
MTVKNDSIQSTFLFHDYETFGTHPALDRPAQFAALRTDNDFNVIGEPEVFYCKPADDYLP
QPGAVLITGITPQEAREKGENEAAFARRIHALFTVPKTCVVGYNNVRFDDEVTRNIFYRN
FYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTRANGIEHSN
AHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAW
RGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVK
LVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRENPQVRDKVVAIFAEAEPFAA
SDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTL
DDAEQQRWLEHRRQVLTPEFLQQYANELQMLSQQYAEDKTKLGLLKSLWQYATEIV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgacagttaaaaacgacagcatacagagcacattcctcttccacgattacgaaaccttc
ggtacgcatccagccctcgacagacctgcgcaattcgccgcgctccgtacggataacgac
ttcaacgttattggcgagccggaggtgttttattgcaaacccgccgatgattatctaccg
cagcccggcgcggtgctgattaccggcatcacgccgcaggaagcgcgtgagaaaggagaa
aacgaagccgctttcgccagacgcattcatgcgctgtttaccgttcctaaaacctgcgtt
gtgggctacaacaatgtgcgctttgatgatgaagtcacgcgcaatattttttatcgcaac
ttttacgatccctacgcctggagctggcagcatgataattcacgttgggatctattggat
gtcatgcgcgcctgttatgcgctgcgcccggagggaattaactggccggaaaacgacgac
ggcctgcccagctttcgtctggaacatttaacccgggcgaacgggatcgaacacagcaac
gcgcatgatgcgatggcggatgtctacgccactattgcgatggcgcaactggtgaaaaca
cgccagccgcggctgtttgattatctttatagccaccgcagtaaacataaactggcggcg
ctgattgacgttccgcaaatgaagccgctggtgcatgtctccggcatgtttggcgcgtgg
cgcggtaatacaagctgggtcgcgccgctggcgtggcatcctgaaaaccgtaacgcggtg
atcatggtcgatttagcaggcgatatttctcctcttcttgagctggacagcgataccctt
cgcgagcggctttatacggccaaagccgatcttggcgatcacgccgcagtgccggtaaag
ctggtgcatatcaataaatgtccggtactggcgcaggcgaataccttgcgcccggaggat
gccgaccggctgggaattaaccgccagcactgcctggataacctgaaagtgctgcgtgaa
aacccgcaggtccgcgacaaagtggtggcgattttcgccgaagccgaaccttttgccgcc
tcggataacgttgatgcccagctctatgatggttttttcagcgatgccgatcgcgcagcc
atgaaaatcgtactcgaaaccgagccgcgtaacctgcccgcgctggacattacctttgtc
gataagcgcattgagaagctgctgtttaattaccgcgcacgcaattttcccggtacgctg
gatgacgcagagcagcagcgctggctggagcatcgacgtcaggtgctgacgccggagttt
ttacaacaatatgccaatgaattgcagatgctttctcagcagtatgcggaagataaaacg
aagctggggttgctgaaatcactgtggcagtacgcaaccgagattgtgtaa
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integrated database retrieval system
