Salmonella enterica subsp. enterica serovar Heidelberg SL476: SeHA_C4103
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Entry
SeHA_C4103 CDS
T00738
Name
(GenBank) sigma-54 dependent transcription regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
seh
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Brite
KEGG Orthology (KO) [BR:
seh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seh03000
]
SeHA_C4103
Transcription factors [BR:
seh03000
]
Prokaryotic type
Helix-turn-helix
Other families
SeHA_C4103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
NACHT
AAA_16
Mg_chelatase
HTH_Crp_2
AAA_2
AAA_14
IstB_IS21
TrmB
AAA_24
AAA_7
nSTAND3
DUF5669
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACF70346
UniProt:
A0A6C6ZSK2
LinkDB
All DBs
Position
complement(3986758..3989556)
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AA seq
932 aa
AA seq
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MRRIEIVLGELERLTRGLCLADLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVYFLHRQALETLLGRQLEESEREVRSVADVLPHEEHYAPDDPFTSLIGYDRSLRD
AVEKGRAAVLYPHGLHVLLTGPSGVGKTFFAELMHRFACEQASGAIPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGANEHKTGLVEQADGGYLLLDEVHRLSYEGQEKLFSILDKGEY
RPLGVSSQPRSISVRLICATTEPVGSALLRTFQRRIQVCIDLPGIRQRSVEEQIELIVGF
LQRESRKIERTVSIDKPLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEHNDTLQLD
KRLAEMSINPTPEQRLLVDTLFEGKARLNIDARTLPALKTSLATGAEIEESDLFYSFLTR
EYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEERVTLLIGCVEQ
VLGFSLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILIAHGATTATSQAQYVNRVLEREL
FSAIDMPFEQSVHDTLETLTQMIQTRQYRRLILLVDIGSLIHFGSTISKLFQIDVLLMPN
ITLTSLLEVGLDLSYETSDLPQLTALLQSKNIPCQLCTPQQENGGKVLVISCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQALNASERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSNAERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVFNHLTSSLSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALESQPNLDARAF
SVIKSAFLPIEDAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtattgagatcgtactgggagagctggaacggctgacgcgcgggctatgtctt
gccgatttggcgcaggagacggcgtttacggcggaggcgataggtttcaatcttgggctg
gcgcgtaactccgtcagcaaagatctcaatcagttatggaatgacggcctggcaatcaaa
agccgtggccgcccggtctattttctgcatcgccaggcgctggaaacgttgctgggacga
cagctggaagagtctgaacgcgaggtgcggtcggtggcggatgtgctgccgcatgaagag
cattacgcgcccgacgatccgtttaccagcctgattggttacgatcgcagcctgcgcgat
gcggtagaaaaaggccgtgcggcggtgctctatccgcacggtttacacgttctgcttacc
gggccgtccggcgtcggtaaaaccttttttgcggaactgatgcaccgtttcgcctgtgaa
caggcgagcggcgctatcccgccgctggtctactttaactgcgcggaatacgcccataac
ccggaactgctctcctcgcatctgtttggtcatcggcagggggcgtttaccggcgcgaat
gaacataaaacaggcctcgtggagcaggcggacggtggttatctgctgctggacgaggtg
caccgtctgtcttatgaagggcaggaaaagctgttctctattctggataaaggcgagtac
cgtccgctcggcgtgagcagccagccgcgatcaatttcggtacgcctgatttgcgccact
accgagccggtcgggtcggcgctgttacgtactttccagcggcgtattcaggtatgcatt
gatttgccgggtattcgccagcgctccgttgaagaacagatcgaactgatcgtggggttc
ttacaacgggaaagccgcaaaatagaacgcacggtcagcattgataaaccgttgttgctc
tggttgctgaataaaccccttgaaggcaatatcggtcagctaaaaagcgatattcagttt
ctctgcgctcaggcgtgggcatcgggaatgaccgagcataacgacacgctacagctggat
aagcggctggcggagatgtcgattaacccgacgccggaacagcgtctattggtggatact
ctgtttgagggtaaagcgcggctaaatatagacgcgcgcacgctgcccgcattgaagacg
tcgctggcgaccggggcggaaattgaagagagcgacctcttttacagcttcctgacgcgc
gaatatgttaatttgcgcaacagtaacgtccccccggcggagacgctggcgatcctgaaa
aataaactcagctcgatttttgaatacggtctctacagccgcgacagcgtggcgcatccg
ccgcgctatggcgaccagattgaagagcgcgtgacgctgctgattggctgcgtagagcag
gtgttgggcttttcgctgccggaaaatctggttaacccactgcgtaaacacttcctggcg
ctgataggctacgtgcagcgcggcctgatcccgcagctttactcttccagtttgatcctg
gatcgctgcaaagacgaatatgacaacgccacgctgctgtgtcggaaaatcaacgaactg
ctgcatattcagtgtccggcgacggaagtggtctggctatgcctgttcctgaaagagtgc
cgccattatcgtcagcgcatcgatgccagccccgactgcggggttattttaatcgcccac
ggcgcgaccaccgccaccagtcaggcgcaatatgtcaaccgcgtgctggagcgcgagttg
ttcagcgccatcgacatgccgtttgaacagtcggtgcatgacacgctggaaacgctgacc
caaatgattcaaacccgccaatatcggcggcttatcctgttggtggacatcggctcattg
atccatttcggcagtacgatcagtaagttattccagatagatgttttgctcatgccgaac
atcacgctgaccagtctgctggaagtcgggctggatttaagctatgaaaccagcgactta
ccacagttgacggcgctcctgcagagtaaaaatatcccctgccagctttgtacgccgcag
caggagaacggcggcaaagtgctggtcatctcctgtattactggcatgggaacggcggaa
aaaatcaaaaaggtgctggaggagagctttggcgaactgatgtcgcaggacaccaggatg
gtgatccttgattataacgaggtacgaagtctggagcgcgttcagcaggcattgaatgcc
agcgagcggctggcggggattgtcggcactttccagccggggctgccggatattccgttt
atttcgctggaagagcttttctccgaacaagggccggaactggtgttgagcctgttaacg
cccgatctgtccaacgctgaacgccgtctggagatggagcgcagcgccatgcgctttatc
agcgcgctaacgatggagagtatcatcaaccatatttccgtgcttaacccgcagcgtatt
ctgaaagagatggagggcgtttttaaccatctgacgtcttcgctttccctgaaaccaagc
cgccaggtgacactgcgcttcctgatccactgctgctgtatggtagagcgtattgtgatt
aaccgaaaaccgttacagatggcgttggaaagtcagccgaatctggacgcgcgcgcgttt
agtgtcatcaaatccgcttttctgccgatcgaagacgcctacgccatccgtttatcggat
gcggaatatttttatatctacgaactgctctatagttaa
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