Secondary endosymbiont of Heteropsylla cubana: A35E_00058
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Entry
A35E_00058 CDS
T02336
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sehc
Secondary endosymbiont of Heteropsylla cubana
Pathway
sehc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sehc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A35E_00058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sehc03400
]
A35E_00058
Enzymes [BR:
sehc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A35E_00058
DNA repair and recombination proteins [BR:
sehc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A35E_00058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
SH3_13
SLFN-g3_helicase
DEAD
nSTAND3
AAA_16
UvrD_C
PhoH
NDNF_N
AAA
Zeta_toxin
AAA_28
AAA_7
MukB
T2SSE
Sigma54_activat
Mg_chelatase
AAA_18
SRP54
Motif
Other DBs
NCBI-ProteinID:
AFP85381
UniProt:
J3VTR9
LinkDB
All DBs
Position
complement(114621..116489)
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AA seq
622 aa
AA seq
DB search
MKSILSEAQQLSCFRSIDVQFGLMVATRSDDNQGLMLLASVWVSANTAMGHVCLPLKDLN
RKNLFSGRMPELARRAWIHAGNPSLKDWKKCLLASQAVSDGSRPTPLVLEHDNLYLQRMW
EYECIVANFFNQPRIIPIKLDEVRIADVLRRYFPGDTHVVNWQKVATAIAITNFVVLISG
GPGTGKTSTVAKVLASLLQISNQQQQYLRIVMAAPTGKAAIRLSQSLGLALQHLELNEEQ
KKQLPREAVTLHRLLGLETDSQRMRYHSNNLLNLDILIIDEASMIDLPMMAHLVSAVPAK
ARVIFFGDHCQLSSVESGAVFKDICQFIKSGYSLNRREQLKRLTGFTLPGEKVRDVFRVS
DSLCLLRKSYRFNKNSGIAKLANAINSGNGKTALKLLKSSTVKDIDYISLYNLKDYQSMI
DNCIQGYQDYLRCLHNNDEPRVILESFNRFRLLCALRNGIFGVEGLNCSIEQALNRIGLI
TLDNGNSSYLGRPIMIMENEVSMGLYNGDIGLVLSKNIYSLCVYFPLSDGGVKEVPISLL
PKHETAFSMTVHKSQGSEFERVVLVLPNKTSSLLTRELFYTAVTRVRKRFSLYARDDIVR
HIISNRIQRNSGLVQRLSIKLV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctattctttcagaggcgcaacaattatcttgttttcgatctatagatgttcaa
tttggtttaatggtagcaacaagatctgatgataatcagggattgatgctactagctagt
gtgtgggtaagtgctaataccgctatgggtcatgtttgtttacccttgaaagatttgaat
cgaaaaaatctattttctggtcgaatgccagaattggcacgacgagcatggatacatgct
ggcaacccttctctaaaagattggaagaaatgtcttctagcgtcacaagctgttagtgac
ggttctcgacctaccccgcttgtcttagagcatgataatctatatttacaacgcatgtgg
gaatatgaatgcatagtagcaaatttttttaatcaaccaaggataatacccataaagctt
gatgaagttagaattgctgatgttttaagacgttatttccctggtgatacacatgtagtt
aattggcaaaaagttgctacagcgattgcaataacaaatttcgtagttcttatatccgga
gggcctgggactggaaaaacctctacggttgcaaaggtacttgcatcactattgcaaatt
agtaatcaacaacagcagtatttgcgtattgtaatggcagcccctaccggtaaagcagct
atacggctaagtcaatcgttaggtttggcattacaacatttagaattaaatgaagaacaa
aaaaaacagttaccgcgtgaagcagtaacactacatcgtttgcttggattagagactgat
agtcaacgtatgcgttatcactctaataatttattgaatttagatattttaataattgat
gaagcttcaatgattgatttaccaatgatggctcatcttgtttcggctgttcctgcgaag
gctcgggtaattttttttggggatcattgtcaactgtcttctgtagaatcaggtgcagtt
tttaaagatatttgtcagttcataaaatcaggttatagccttaatcggcgagaacaatta
aagcgattaactggttttacattgccaggagagaaagttcgtgatgtttttagagtttct
gatagtctttgcttattaaggaaaagctaccgttttaataaaaattctggtatcgcaaag
ttagctaatgcaattaattccgggaacgggaaaacagcattaaaacttctaaaatcttca
acggtaaaagatatagattatatatcactttataatttaaaagactatcaaagcatgata
gataactgcattcaaggttaccaagactatttaaggtgcctacataataatgatgaaccg
agagtgattttagaatccttcaatcgttttcgtttactttgtgctctacgtaacggaatt
tttggagttgaagggcttaattgttctattgaacaggctttgaatcgcattggtttgatt
actcttgataacggtaattctagttatttaggtcggcctataatgattatggaaaatgag
gtttcgatggggttgtataatggggatattggtcttgttctatcaaaaaatatatattcg
ttatgtgtttattttcctctatcagatggaggtgtaaaagaagtgccgataagtctgtta
ccaaaacatgaaacggctttttcgatgacagttcataaatctcaggggtcagagtttgag
cgtgttgtattagtattacctaataaaacctcttctttacttacaagagagctattctac
actgcagtaacacgagtacgcaagcgattttctctctacgctagagatgatatcgttcga
catattatttctaatcggattcagagaaatagtggtttagttcaacgattatctattaaa
ttagtatag
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