Secondary endosymbiont of Heteropsylla cubana: A35E_00600
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Entry
A35E_00600 CDS
T02336
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sehc
Secondary endosymbiont of Heteropsylla cubana
Pathway
sehc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sehc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A35E_00600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sehc03019
]
A35E_00600
03016 Transfer RNA biogenesis [BR:
sehc03016
]
A35E_00600
Enzymes [BR:
sehc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A35E_00600
Messenger RNA biogenesis [BR:
sehc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A35E_00600
Transfer RNA biogenesis [BR:
sehc03016
]
Prokaryotic type
tRNA degradation factors
A35E_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_2
S1_RRP5
Spt6_S1
KH_2
KH-I_KHDC4-BBP
DUF3016
Motif
Other DBs
NCBI-ProteinID:
AFP85882
UniProt:
J7GT17
LinkDB
All DBs
Position
1067840..1069957
Genome browser
AA seq
705 aa
AA seq
DB search
MLHPIVLKFQYGQHTVTLETNMIARQATASVMVTMDDTAVFLTVVGEKQEKPGQNFFPLT
VNYQERSYAIGRFPGGFFRREGRSSENEILISRLIDRSIRPLFPEDFLNEVQIVATVVSV
NPQVNPDIVAMIGASAVMSLSGIPFNGPVGAARVGYINNQYILNPTQIELSSSRLDLVVA
GTKDAVLMVESEANILNEDQMLGAVIYGHNQQQIVIDSINRLIAQSEPKKWSWKTKEINV
DLKNRIALLAESRLNDAYQITEKQIRYTAIDAIKTDVIIDLTTQDETLDANEIKKILGML
EKNIVRNRILHGKPRIDGREKDMIRSLDIRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQCLDELTGERTDRFLLHYNFPPYCVGEMGTIGAPKRREIGHGRLAKRGVLAVMPTASE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKGAVAGIAMGLVKEDNNFIVLSD
ILGDEDHLGDMDFKVAGSFEGITALQMDIKIAGITREVMQIALNQAKGARLHILRVMEQA
ISTPRKDLSEFAPRIHTIKISQDKIRDVIGKGGSVIRTLIEKTGTTIEIEDDGTVKVAGT
NSEKARYAIRCIEEITAEIQLGRIYSGKVTRIVDFGAFVSISSSKEGLVHISQISDKRVE
KVSDYLELGQKVLVKVLDIDRQGRIRLSLKETGFLKEKTTITKES
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgttacatccgattgttctcaaatttcaatacggccaacatactgttacattagaaact
aatatgatcgctcgacaggcaactgcttcagtcatggtcaccatggatgacacagccgta
tttttaactgttgttggagaaaaacaagaaaaaccaggacaaaatttttttccattaact
gtaaactatcaagaacgttcttatgctatcggtcgttttcctggtggattttttcgtcgt
gaaggacgttcaagcgaaaatgaaatactgatttctagactaattgatcgttctattcgt
ccattgtttccagaagattttttaaatgaagtacagattgtcgctacggtcgtttcagta
aatccccaagtaaatcccgatattgtagcaatgatcggcgcttctgcagtgatgagcctc
tccggcattccatttaatggccctgtcggcgcagcacgcgttggttacatcaacaatcaa
tacatactaaatccaactcagattgaattaagctctagccgccttgatcttgttgttgcc
ggaacaaaggatgctgtattaatggtagaatctgaagcaaatattctcaatgaagatcaa
atgcttggcgcagtgatctatggccacaatcagcaacaaatcgtcattgatagcattaat
cgactaatagctcaaagcgagccaaaaaaatggtcatggaaaacaaaagaaattaatgtt
gacctgaaaaatcgtatcgctctcttagctgagtctcgcctaaacgacgcctatcaaata
actgaaaaacaaatacgttatactgctattgacgccatcaagacagacgtgattatagat
ttaaccactcaagacgaaaccctagatgcaaatgagattaagaaaatacttggcatgctt
gaaaaaaatatagtacgcaacagaatcttgcatggaaaaccccgtatcgatgggcgtgaa
aaagatatgattcgcagcctagatatccgaaccggtgttttaccccgaactcatggatct
gcactatttactcgaggggaaactcaagcattggtcactgcaacgctaggaactgaacgt
gatgcacaatgtcttgatgagttgactggtgaacgtactgatcgtttcctgctacactat
aattttccaccatactgcgtcggtgaaatgggaacaataggtgccccaaagcgacgcgaa
atcggtcatggccgtttggcaaagcgtggtgtattggcggtaatgcccaccgctagtgaa
tttccatatactgttcgtgtggtatctgaaataacagaatcaaacggttcttcctctatg
gcctccgtttgtggggcatcgctcgcgcttatggatgcgggagtgcctatcaaaggagcc
gttgctggaatcgccatggggttagtaaaagaagacaataactttattgtattatccgat
attttaggtgatgaagaccatttaggcgatatggattttaaagttgctggtagcttcgaa
gggataaccgcactacaaatggacattaaaattgcaggaattactcgtgaagttatgcaa
atagctttaaatcaagctaaaggtgctcgtctgcatatccttcgcgtaatggaacaagca
attagcactccacgcaaagacctttctgaattcgctcctcgaattcatacgattaaaatt
agtcaagataagattagagacgtcattggaaaaggtggttccgttatccgaacattaata
gaaaaaaccggtactacgattgaaattgaagatgatggtactgtaaaagtcgctggaacc
aatagcgaaaaagctcgttatgctattcgttgtatcgaagaaattactgctgagatccaa
ctaggacgtatttatagtggtaaagtaacacgaatagtagatttcggagcatttgtatca
atcagtagtagtaaggaagggctagttcatatttcgcaaatttctgataaacgagtagaa
aaagttagcgattatttagaacttggacaaaaagttctagttaaagtcctagacatagac
cgtcaaggccgcattcgcttaagtttaaaagaaaccgggtttcttaaagaaaaaaccacc
attactaaagaatcataa
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