Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_0198
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Entry
SPC_0198 CDS
T00862
Symbol
pcnB
Name
(GenBank) polyA polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPC_0198 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sei03019
]
SPC_0198 (pcnB)
Enzymes [BR:
sei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SPC_0198 (pcnB)
Messenger RNA biogenesis [BR:
sei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPC_0198 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
PhoR
Motif
Other DBs
NCBI-ProteinID:
ACN44388
UniProt:
C0Q5P6
LinkDB
All DBs
Position
complement(210299..211717)
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AA seq
472 aa
AA seq
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MTLPRCAIFTRVANFCRKVLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVLY
RLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGNGYETYQQLREYHLFQPLFPTITRYFTENGDSAMER
IIAQVLKNTDNRIRNEMRVNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNDVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLELRAQVENN
TELQRLAQWWAEFQASAPPEQKGMLNELDDDPAPRRRRSRPRKRAPRREGTV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacactaccgaggtgcgctatttttacccgagtcgctaatttttgccgtaaggtgtta
agccgcgaggagagcgaggcagaacaagccgtcgcccgtccacatatgacgattatcccg
cgtgaacagcacgctatctcccgcaaagatatcagtgaaaatgccctcaaggtactgtac
aggctgaacaaagcgggctatgaagcctacctggtcggcggcggcgtccgcgatctcctg
ctcggcaaaaagccgaaggatttcgacgtgactaccaacgcaacaccggatcaggtacgg
aaattattccgcaattgccgtctggtgggacgtcgtttccgcctggctcacgtgatgttt
ggcccggaaattatcgaagtggcaacgtttcgtggtcatcatgaaggcagtgaaagcgac
cgtacgacctcccagcgtgggcaaaacggtatgctgctgcgcgacaacatcttcggttct
atcgaagaagatgcccagcgccgcgatttcaccatcaacagcctttactacagcgtagcg
gattttaccgtgcgcgattacgtcggcgggatgcaggatctgcaagaaggcgtgattcgc
ctgatcggcaatccggaaacgcgctaccgcgaagatccggttcgaatgctgcgcgccgtg
cgtttcgctgcgaagctcaatatgcgtatcagccctgaaacggctgagccaatcccgcgt
ctggcaaccttgctaaacgacattcctcccgcgcgcctgttcgaagagtcgctgaagctg
ttgcaggcggggaacggttatgaaacctatcaacaactgcgggaataccacctcttccag
ccgttgtttcctaccattacgcgttatttcaccgaaaacggcgacagcgcaatggaacgc
atcattgcgcaggtgttgaagaatacagataaccgcatccgtaacgagatgcgcgttaac
ccggcatttttgtttgccgccatgttctggtatccgctgctggagatggcgcaaaaaatc
gctcaggagagcggtctggcctattacgatgctttcgcgctggccatgaatgacgtgctg
gatgaagcctgccgttcactggcgatcccgaaacgccttaccacgcttacccgtgatatt
tggcagcttcagttacgcatgtcccgtcgtcagggcaaacgcgcctggaagctgatggaa
catcccaaattccgcgccgcgtttgatttgctggagctgcgcgcccaagtggaaaataat
actgaactgcaacgtctggcgcagtggtgggccgagtttcaggcttccgcgccgccggaa
caaaaagggatgctcaacgagctggacgacgatcctgctccacgccgccgccgttcacgt
ccgcgcaaacgcgcgccgcgccgcgagggcaccgtatga
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