Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_0662
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Entry
SPC_0662 CDS
T00862
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei03030
DNA replication
sei03430
Mismatch repair
sei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPC_0662 (holA)
03430 Mismatch repair
SPC_0662 (holA)
03440 Homologous recombination
SPC_0662 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sei03032
]
SPC_0662 (holA)
03400 DNA repair and recombination proteins [BR:
sei03400
]
SPC_0662 (holA)
Enzymes [BR:
sei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPC_0662 (holA)
DNA replication proteins [BR:
sei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPC_0662 (holA)
DNA repair and recombination proteins [BR:
sei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPC_0662 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ACN44839
UniProt:
C0PW76
LinkDB
All DBs
Position
complement(698874..699896)
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AA seq
340 aa
AA seq
DB search
MYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTDWGS
LFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKAQEN
AAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNLQLDDAANQLLCYCYEGNLLALAQ
ALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEGSEP
VILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGDALQRLHPAQLRQAVQ
LLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgtatcctgaacaactccgcgcgcagctcaatgaagggctgcgtgcggcatatctgcta
ttgggcaacgatccgctgctgctgcaggaaagtcaggacgctattcgtctggcggctgcg
tcgcaaggcttcgaagagcaccacgcttttactctcgatcccagtaccgactggggatcg
cttttctcactctgccaagcgatgagtctgttcgccagccgtcaaacgctggtgctgcaa
ctgccggaaaacgggcctaacgcggcaatgaatgagcaactcgccaccctgagcgagctg
ctgcatgacgacctgttattaatagtacgcggaaacaagctcaccaaagcgcaggaaaac
gccgcctggtataccgcgctggcagaccgtagcgttcaggtcagttgtcagacgccggag
caggcgcagcttccccgctgggtggccgccagagcgaaagcacagaatttgcaactggat
gacgccgcgaaccaactgctgtgctattgctatgagggcaatctgttggcgctggcgcag
gcgctggaacggctgtcgctgctttggcctgacggtaagttaacgcttcctcgcgtggag
caggccgtcaatgacgccgcccactttacccctttccactgggtggatgcgttactgatg
gggaaaagcaaacgcgcgctgcatatcctgcaacagctacgccttgaaggcagcgaaccg
gttattctgctgcgcaccctccagcgagagctgctgctactggtaaatctcaaacgtcag
tccgcgcatacgccgttacgcgcgctgtttgataaacaccgggtctggcaaaaccgtcgc
cccatgatcggcgacgcgttgcagcgtctccatcctgcacagcttcgccaggccgtgcag
ttactgacgcgtacagaaattacgctcaaacaggattatggtcagtcggtatgggcagac
cttgaagggctgtcgctcctgctctgccataaggcgctggcagacgtatttattgatggg
tga
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