Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_1317
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Entry
SPC_1317 CDS
T00862
Symbol
yfcX
Name
(GenBank) putative fatty acid oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei00071
Fatty acid degradation
sei00280
Valine, leucine and isoleucine degradation
sei00310
Lysine degradation
sei00362
Benzoate degradation
sei00380
Tryptophan metabolism
sei00410
beta-Alanine metabolism
sei00640
Propanoate metabolism
sei00650
Butanoate metabolism
sei00907
Pinene, camphor and geraniol degradation
sei00930
Caprolactam degradation
sei01100
Metabolic pathways
sei01110
Biosynthesis of secondary metabolites
sei01120
Microbial metabolism in diverse environments
sei01200
Carbon metabolism
sei01212
Fatty acid metabolism
Module
sei_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SPC_1317 (yfcX)
00650 Butanoate metabolism
SPC_1317 (yfcX)
09103 Lipid metabolism
00071 Fatty acid degradation
SPC_1317 (yfcX)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SPC_1317 (yfcX)
00310 Lysine degradation
SPC_1317 (yfcX)
00380 Tryptophan metabolism
SPC_1317 (yfcX)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SPC_1317 (yfcX)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SPC_1317 (yfcX)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SPC_1317 (yfcX)
00930 Caprolactam degradation
SPC_1317 (yfcX)
Enzymes [BR:
sei01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SPC_1317 (yfcX)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SPC_1317 (yfcX)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SPC_1317 (yfcX)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ACN45480
UniProt:
C0PZX6
LinkDB
All DBs
Position
1379983..1382109
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AA seq
708 aa
AA seq
DB search
MLNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIA
GADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRI
CTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDD
VVPQTILLEAAVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPAT
ERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTKVKKDPGSDAPPGP
LNSVGILGGGLMGGGIAWVTACKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIKA
SERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSSL
PIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVV
SDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKI
IPVLEAAYGECFSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLIGV
QGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMD
ALGPGEMVATLQRLAALYGPRYAPCEQLVRMAERREHFWTNGETDQGN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacgtgcgtctggataatgtcgcggttgtcgctattgatgtccctggagaaaag
gtgaacaccctgaaagcggagtttgccgcgcaggtacgcgccatcctgaagcagatccgg
gaaaataaagcgttgcagggcgttgtttttatttcagccaaagcagataactttattgct
ggcgctgatatcaacatgataggtcactgccaaaacgcgcaggaagcggaaacgctggcg
cgtcaggggcaacaactgatggcggagatccaggcgttgcctgttccggttatcgccgcc
attcacggcgcctgcctggggggcggtcttgaaatggcgctggcctgccatcggcgcatc
tgtaccgatgacgttaaaaccgttctcggactgccggaggtacagttagggcttttaccg
ggatcgggcggaacgcagcgtcttccacggctggtgggggtcagtaccgcgctggatatg
atcctgacaggtaaacagcttcgcgccagacaggcgcttaaagccgggctggttgatgat
gtggtgccgcaaaccattttactggaagcggctgtcgagctggctaaaaaagaacgtctg
gcgcagcggacattaccggtccgggaacgtatcctggcggggccgttgggacgcgcgctg
ttatttcgcctggtgcgtaaaaagacggcgcaaaaaacgcagggtaattatccggcgacg
gagcggatcattgatgtgattgaaactggactggcgcagggcagcagtagcggctatgac
gcggaagcgcgcgctttcggcgagctggcgatgacgcctcaatcgcaggcgctgcgcgct
attttctttgccagtaccaaggtgaaaaaagatcccggtagcgatgcgccgcccggcccg
ctgaacagcgtgggcatcttaggcggcgggttaatgggcggcggtatcgcctgggttacg
gcctgtaaaggcggcttgccagtacgaattaaggatataaatactcaggggatcaatcat
gctctgaagtacagctgggatctgcttgaaacaaaagtacgccgccgccatatcaaagcc
agcgaacgcgataaacagttggcgttgatatcaggttcgaccgattaccgtggtttcagt
catcgtgatctggtcattgaagcggtgtttgaagatctgccgttaaaacaacagatggtg
gcggaagtggagcaaaattgcgctgctcacaccatttttgcctccaatacttcttccctg
ccgattggcgatattgcggcgaatgcggccagaccggaacaggtgattggattgcacttt
tttagcccggtcgaaaaaatgccgctggttgaggttattcctcatgcgtctacttccgcg
cagaccatcgccacgaccgttaagctggcgaaaaaacagggtaaaaccccgatagtcgtc
agtgataaagccgggttttatgttaaccgaattcttgcgccgtatatcaatgaggcgatt
cggatgctgactgaaggcgaacgcgtcgaacatattgacgccgccctggtaaaatttggt
tttccggtggggccaatccaacttttggatgaggtaggaatcgacacgggcactaaaatt
attcctgtgcttgaggcggcgtatggagaatgttttagcgcacctgcaaatgttgtcgct
tcaattttgaatgacgatcgcaaaggtagaaaaaatggtcgcggtttctatctttatggc
gaaaaagggcgtaaaagcaaaaaacaggttgaccctgctatttataagcttattggcgtg
caagggcagagtcgactgtctgcgcagcaggtggcagagcgctgtgtcatgttaatgctt
aacgaagcggcgcgctgtttcgacgaaaaagtgattcgcagcgcgcgcgatggcgatatt
ggcgccgtgtttggtatcggttttccgccgtttctcggtggcccgttccgctatatggat
gctctcgggccgggtgaaatggtggcgacattacagcgcctggccgcactttacggtcct
cgttacgcgccttgtgaacaattagtgcgcatggcggagcgcagggagcatttctggacg
aatggggaaactgaccagggaaattga
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