Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_1678
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Entry
SPC_1678 CDS
T00862
Symbol
pocR
Name
(GenBank) pdu/cob regulatory protein PocR
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sei03000
]
SPC_1678 (pocR)
Transcription factors [BR:
sei03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SPC_1678 (pocR)
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Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
ACN45825
UniProt:
C0Q1N9
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Position
1756616..1757497
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AA seq
293 aa
AA seq
DB search
MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRC
RMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVNIL
NVDDRWQADPELLNEFRNVPEMDYSRVIASSDLLKLIVENCLKKQLNFVVIKDNPQQSEA
NKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAW
VNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVSARPIRLRRRLIASR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcgagcgctctgaactcagaactcattaataaaatcgcacaggattttgca
caagccaccggtctggcggttgtggttgtcaatattcatggtgatgaaatatctgagcta
ttcaatttcacgccgttttgtcagttgatgcggcagcatccccagcatagtacacgttgt
cgtatgagcgatcgctgcgggggactggaggcatcgaagtccgatcaaccctgtatttat
cgttgtcatgccggtctaacggatttttctattccgctggtaatcgcagggcatttagtt
ggctttgttttatgcgggcaggttcgtttaagtaatgacgtggagctggtaaacattctt
aatgttgacgatcgctggcaggctgaccctgagctcttgaatgaatttcggaatgtgcca
gagatggactattcacgcgttatcgcttcctccgatcttcttaaactgattgttgagaat
tgcctgaaaaaacagctcaatttcgtggttatcaaagacaatccgcagcaatcggaggca
aataaaaccactcgtggtcccactccgcatgacagtaaaatgaaaaaagcgcttcgctat
attgatgcgcatttgtccgacgatcttcgtcttgaggatgtcgcctcacatgtctatctc
agcccctattacttcagtaagctattcaagaaatatcagggaatcggatttaatgcgtgg
gtaaaccgccagagaatggttagcgccagagaattgctttgccatagtgactggagtatt
gccagtattgcgcgtaatttaggcttttcgcaaaccagctatttttgcaaagtctccgcc
agacctatcaggttacgccgcaggcttatcgccagcagataa
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