| Entry |
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| Symbol |
rnb
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| Name |
(GenBank) exoribonuclease II
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| KO |
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| Organism |
sei Salmonella enterica subsp. enterica serovar Paratyphi C
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| Brite |
KEGG Orthology (KO) [BR:sei00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:sei03016]
SPC_2030 (rnb)
Enzymes [BR:sei01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SPC_2030 (rnb)
Transfer RNA biogenesis [BR:sei03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SPC_2030 (rnb)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2082272..2084206)
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| AA seq |
644 aa
MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQH
EFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSK
LDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAF
FAATIESKAKLAYDNVSDWLENNGTWQPDNEGIAQQIRLLHRICLSRSEWRHHHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFD
PANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRM
AERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDA
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA |
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| NT seq |
1935 nt +upstreamnt +downstreamnt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaggttgacgcg
caaaaaagctacttcattcctccgccgcagatgaaaaaagtgatgcatggcgatcgtatc
gtcgcggtcatccacacggaaaaagaacgtgagtctgccgagccggaagaactgatcgaa
ccgttcctgacgcgttttgtgggaaaagttcagggtaaaaatgaccgcctgtccatcgtg
ccggatcatccgttgctgaaagacgcgattccctgccgcgccgcgcgcggcgttcagcat
gagttcaaagaaggtgactgggcggttgccgaaatgcgccgccatccgcttaaaggcgac
cgttcgttttacgccgatttaacgcagtacatcacctttgccgacgatcactttgttccc
tggtgggttacgcttgcccgccataacctggaaaaagaagcgccgaacggcgtagcgacg
gagatgctggacgaagggctggagcgccaggatcttaccgcgctgaatttcgtcactatc
gatagcgccagcactgaagatatggatgacgcgctttatgctgaggaattagcggacggc
agactccagcttacggtggctatcgccgatcctaccgcctggattgccgaaggcagtaag
ctggataacacagcgaaaattcgcgccttcaccaactacctgccgggcttcaatattcct
atgctgccacgtgagctgtctgacgatctgtgctcactgcgcgccaacgaagtgcgtccg
gcgctcgcctgtcgcatgatcatcgccgcagacggcaccattgacgatgatatcgccttt
tttgcggccaccatcgaatcgaaggccaagctggcgtacgacaatgtctccgactggctg
gaaaataacggcacctggcagccggataacgaaggcattgcccagcagattcgtctgttg
caccgtatttgtctaagccgcagtgagtggcgtcatcatcatgcgttagtctttaaagac
cgcccggattaccgctttgtgcttggcgaaaaaggcgaagtactggatattgtggcggaa
ccgcgccgtatcgctaaccgtatcgtagaagagtcgatgatcgccgctaacctttgcgcc
gcgcgcgtactgcgcgataagctcggtttcggtatttacaacgtacatacgggcttcgat
cccgcgaatgccgacgcgctggccgcgctgctgaaaacgcatggtctgcatgtcgatgcc
gaagaggtgctgacgctggaaggcttctgtaaactgcgtcgcgaactggatgcgcagccc
tccggtttccttgacagccgcattcgtcgcttccagtcttttgcggaaatcagcaccgag
ccggggccgcatttcggtcttggtcttgaggcttatgccacctggacctctcccatccgt
aagtatggcgatatgattaaccatcgcctgctgaaagcggtcatcaagggggaggctatt
gcgcgtccgcaggaagatatcacccagcaaatggcggaacgccgtcgcctgaaccgcatg
gcggagcgcgatgtcggcgactggttatatgcacgcttccttaacgataaggcggggaca
aatacccgtttcgcggcagaaattattgacgtcagccgcggtggtatgcgtgtgcgactg
gtcgataacggcgctatcgcctttatccctgccccattcctgcacgccgttcgcgatgca
ctggtatgcagccaggaaaacggtacggtacagattaaaggtgagacggtttataaagtg
acggatgtcattgatgtcactattgcggaagttcgcatggaaacccgcagcattattgcc
cgaccggcagcgtaa |
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