KEGG   Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_2833
Entry
SPC_2833          CDS       T00862                                 
Symbol
ygaF
Name
(GenBank) putative GAB DTP gene cluster repressor
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
sei  Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei00310  Lysine degradation
sei01100  Metabolic pathways
sei01120  Microbial metabolism in diverse environments
Module
sei_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:sei00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    SPC_2833 (ygaF)
Enzymes [BR:sei01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     SPC_2833 (ygaF)
SSDB
Motif
Pfam: DAO Mqo Pyr_redox_2 NAD_binding_9 NAD_binding_8 FAD_binding_2 Thi4 Amino_oxidase
Other DBs
NCBI-ProteinID: ACN46929
UniProt: C0PWI7
LinkDB
Position
2874058..2875326
AA seq 422 aa
MYDFVIIGGGIIGMSTAMQLIDLYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGS
LKARFCLAGNQATKTFCDQNNIRYDTCGKMLVATSELEMARMRALWERTAANGLEREWLS
AAELREREPNIIGLGGIFVPSSGIVSYRDVATAMANRFQAKGGEIIYHAEVSALTEHAAG
VVIRTSQGREIETATLIGCAGLMADRLVKMLGVEPGFIICPFRGEYFRLAPRHNRIVNHL
IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLALKREGYRKRDVSFTDTLEIFRSAGIRR
VLQNHLLSGLGEMKNSLCKSGYLRRVQKYCPSLTVNDLQPWPAGVRAQAVSPDGKLIDDF
LFVTTPRSIHTCNAPSPAATSAIPIGAHIVSKVQALRASQSNPGRTLRAARSVDALHAAF
TR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtatgattttgtgattatcggcggcggcattatcggcatgtcgaccgccatgcaactt
attgatctctatccggatgcgcgcatcgcgttgctggaaaaagagtccgcgccagcctgc
caccagaccgggcataacagcggcgtgatccatgccggggtgtactacacgcccggcagc
ctcaaagcgcggttttgtctggcgggcaatcaggcgaccaaaaccttttgcgatcaaaac
aacatccgctacgacacctgcggcaaaatgttggtcgccacctcggagctggaaatggcg
cggatgcgcgcgctatgggagcggacggcggccaacggcttagagcgcgagtggttaagc
gcggcggagctgcgtgaacgcgaacccaatatcattggcctgggcgggatttttgtccct
tccagcgggattgtcagctatcgcgatgtcgcgacggccatggcgaaccgctttcaggcc
aaaggcggcgagatcatctaccatgccgaggtcagcgcgctaacagaacatgccgctggc
gttgtcattcgcacctcgcaaggtcgggaaatcgaaaccgctacgcttatcggctgtgca
gggctgatggcggatcggctggtcaaaatgctgggcgtggagcccggttttattatctgc
cctttccgcggcgagtactttcgtctggccccgcggcacaaccggatcgttaaccatttg
atctacccgatccccgatccggcaatgccgtttctcggcgtccatcttacccgcatgatc
gacggcagtgtcacggtcgggccgaatgcggtgctggcgcttaaacgcgaaggctaccgt
aagcgcgacgtttccttcaccgacaccctggagattttccgctccgccggcattcgccgc
gtactgcaaaaccatctgctttccggactgggcgagatgaaaaactcgctgtgcaaaagc
ggctatttgcggcgagtacaaaagtattgccccagcctgaccgtcaacgatctccagccc
tggccggcaggcgtgcgggcgcaggcggtttcaccggacggcaaactgattgatgatttt
ctgtttgtcacgacgccgcgttccattcacacctgtaacgccccctccccggcggcgaca
tcagcgatacctatcggcgcgcatatcgtcagtaaagttcaggcgctacgcgcaagccag
agcaaccccggacgtacgctgcgtgcggcacgcagcgtggacgcactacacgccgcattt
acccgttaa

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