Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_3051
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Entry
SPC_3051 CDS
T00862
Symbol
recB
Name
(GenBank) exonuclease V subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPC_3051 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sei03400
]
SPC_3051 (recB)
Enzymes [BR:
sei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SPC_3051 (recB)
DNA repair and recombination proteins [BR:
sei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPC_3051 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACN47139
UniProt:
C0PXI1
LinkDB
All DBs
Position
complement(3085372..3088860)
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AA seq
1162 aa
AA seq
DB search
MIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLSVEELLVVTFTEAATEELRGRIRSN
IHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQMDEAAVFTIHGFCQRMLSL
NAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIAQVVFDVWKGPKALLKDIDR
YLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAVSELDALIESSGIDRRKFNR
GNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKAGGVTPQHPLFVAIDNLLGE
PLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDTALRSESGEALAAAIRTRFP
VAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIYAFRGADIFTYMKARSEVSA
HYTLDTNWRSAPGMVNSVNKLFSQMNDTFMFRDIPFSPVKFAPRNQSLQFKVNDAPQPAM
TLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALLTNGDSSRPVRASDISVLVR
SRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVLQAVMAPERENTLRSALATS
MMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPMLRALMSARNIAENLLATAG
GERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDSNASSQQLRLESDKHLVQIV
TIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDLSHAEESIALAEAERLAEDL
RLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGRLLQKGEPMDAAGLRACIEA
LCDEDIVCRTPGNTDNDRWQIAAASHAELSARTLQRLLYDSWRVTSYSGLQQRGHSVAQD
LIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFEELDFTQPIDPQWVQEKLEL
SGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVEMEFYLPIAQPLTAGELDAL
IRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLDYKSNWLGEDSAAYTQTAMA
AAMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIYLFLRGVDSERPQQGIFTTR
PAAALINQLDDMFAGEMSEEAQ
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttgattgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcgg
ttattgctcggcttgggcggcagtgccgcatttccccgcccgttgagcgttgaagaactg
ctggtggtaacctttacggaggccgccactgaagagctgcgtgggcgaatccgcagtaat
atccatgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctttatgcccgc
ttgctggaagaaattagcgacaaaaagcaggccgcacagtggttattactggcggaacga
caaatggacgaggccgcggtttttaccatccacggtttttgccagcgtatgctcagcctg
aacgctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttg
cgttatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatc
gcgcaggtggtgtttgacgtgtggaagggaccgaaggcgctcttaaaggatatcgatcgt
tatctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggca
tcgcgtcatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcg
gttagcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaagttcaaccgc
ggcaatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagacgaaaaac
tatcaattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaa
gctggcggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaa
ccgctatcgattaaagatctggttcttacccgagcgctatcagagatccgtgaaacggtg
gctcaggaaaaacgccggcgcggcgagctggggtttgacgatatgctcagccgtttagat
accgcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccg
gtggcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgt
atctggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatt
tatgcgtttcgtggcgcggatatctttacctacatgaaggctcgcagcgaagtgagcgcg
cactatacccttgacactaactggcgctccgctccggggatggtgaatagcgttaacaag
ctgttcagtcagatgaatgacacctttatgttccgcgatattcccttcagtccggtaaag
tttgcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatg
actctgtggctaatggagggagaaagctgcggttcgggcgattatcaaagttatatggcg
caggtgtgcgccacacaaattcgcgactggctgcgtgccgggcaaacgggcgacgcgctg
ctgacgaacggcgattcgtcgcggcccgttcgtgcctcggatatcagcgtgctggtacgc
agcaggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtc
tatctttctaaccgcgacagcgtattcgaaacgctcgaagcgcaggaaatgctgtgggtg
ttgcaggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctctggcgacatca
atgatgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggat
gcggttgttgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcct
atgctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacagcggga
ggcgaacgtcggctgacggatattctgcatattagcgaactgttacaggaagccggttcg
cagctggaaagcgaacatgcgctggtgcgttggctggcgcaacatatccttgaacccgat
agcaatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtc
accattcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccat
ttccgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggttctggac
cttagtcatgccgaagagagcatagcactggcggaagccgaacgcctggcggaagacctg
cgcctactttatgtcgcgctgacccgtgcagtgtggcattgcagcctcggcgtcgcgccg
ctggtacggcgtcgcagcgataagaaaggcgagacggatgtgcaccaaagcgcgcttggg
cggctcctgcaaaaaggcgagccgatggatgccgcaggccttcgcgcctgtattgaggcg
ctatgcgacgaggatatcgtgtgtcgaacgccaggcaatacggataacgaccgctggcaa
attgccgctgcatcgcacgcggaactcagcgccagaacgctgcaacgcctgctttatgat
agctggcgcgtcaccagttattctggtttgcagcagcggggacatagcgtggcgcaagat
cttattcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggca
atgacgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacagcctgttt
gaagagcttgattttactcaaccgatagacccccaatgggtacaggaaaaactggagctg
agtggttttgaaacgcgatgggagcccgtacttacccgctggctggacaccgtgttacac
gttccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtc
gaaatggagttttatctgccgattgcccagccgcttaccgccggagagctggatgcgttg
attcgtcgatacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgc
ggcatgttaaagggctttatcgacctggtgttccgttatgaggggcgctattacctgctc
gactataaatctaactggctgggcgaggatagcgccgcttatacccagacggcgatggct
gcggcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcac
cgttaccttcgtcatcgaatggcgaattacgactatgaacgccatttcggcggcgtcatc
tatctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgt
cctgcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggag
gcgcaatga
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integrated database retrieval system
