Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_3062
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Entry
SPC_3062 CDS
T00862
Symbol
ygdP
Name
(GenBank) dinucleoside polyphosphate hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPC_3062 (ygdP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sei03019
]
SPC_3062 (ygdP)
Messenger RNA biogenesis [BR:
sei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPC_3062 (ygdP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ACN47150
UniProt:
C0PXJ2
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All DBs
Position
complement(3101432..3101962)
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMSADAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaatgtaggtatcgtaatttgtaatcgtcagggg
caggtgatgtgggcccggcgatttggtcagcactcctggcagttcccgcagggcgggata
aatccaggggagtcggcagaacaggcgatgtaccgggaactgtttgaagaagttgggtta
agccgtaaagatgtgcggatccttgcttctactcgcaactggttgcgttacaagttacca
aaacgtttggtgcgttgggacacaaagccggtatgtatcggccagaaacaaaagtggttt
cttttgcagttaatgagcgccgacgccgaaatcaatatgcaaaccagcagtacgccggag
tttgacggctggcgctgggtaagttactggtatccggttcgacaagtggtgtcatttaaa
cgcgatgtctaccgcagggtaatgaaagagtttgcaagtgttgtcatggcgcttcaggat
aatccccctaagctacaaagcgcgcctgcttatcgacgtaaaagaggttaa
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