Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_3386
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Entry
SPC_3386 CDS
T00862
Symbol
yrbI
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei00541
Biosynthesis of various nucleotide sugars
sei01100
Metabolic pathways
sei01250
Biosynthesis of nucleotide sugars
Module
sei_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SPC_3386 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sei01005
]
SPC_3386 (yrbI)
Enzymes [BR:
sei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
SPC_3386 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
sei01005
]
Lipid A
SPC_3386 (yrbI)
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Motif
Pfam:
Hydrolase_3
Hydrolase
S6PP
HAD_2
DUF7377
Motif
Other DBs
NCBI-ProteinID:
ACN47471
UniProt:
C0PZL1
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All DBs
Position
3415024..3415590
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AA seq
188 aa
AA seq
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MSKAGASLATCYGPVSTHVMTKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSNIEVAIITGRKAKLVEDRCATLGIVHLYQGQSNKLIAFSDLLEKLTIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTHIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcaggtgcgtcgcttgcgacctgttatggccccgtcagcacccatgtcatg
accaaagcggagaatatccgcctgctcatcctggacgtggatggcgtattgtctgacggc
ctgatttatatgggcaataacggcgaagagctgaaggctttcaacgttcgtgacggctat
ggtattcgctgtgctttgacctccaatatcgaggttgccattattaccggacgaaaggct
aaacttgtagaagatcgctgcgccacgctggggatcgtccatctttatcagggacagtcg
aataagctgatcgcctttagcgatctgctggaaaaactgaccatcgcgccggaaaatgtt
gcctatgtcggcgatgatctgattgactggccggtgatggaaaaagtggggttaagcgtt
gccgttgcggatgcgcatccgctgctgatcccccgcgctgactatgtgacgcacattgcc
ggcgggcgcggcgcggtacgtgaggtgtgtgatttgctgctgctggcgcagggcaagctg
gatgaggccaaagggcaatcgatatga
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