Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_3390
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Entry
SPC_3390 CDS
T00862
Symbol
rpoN
Name
(GenBank) DNA-directed RNA polymerase subunit N
KO
K03092
RNA polymerase sigma-54 factor
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei02020
Two-component system
sei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPC_3390 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPC_3390 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sei03021
]
SPC_3390 (rpoN)
Transcription machinery [BR:
sei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPC_3390 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ACN47475
UniProt:
C0PZL5
LinkDB
All DBs
Position
3417465..3418898
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENNPLLEQTDLHDEIDTQQ
PQDNDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDEIRESMGDVEVDLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEKARLIICDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa
caggccatccgtctgttgcagttgtctacgctggaacttcagcaggaactccagcaagcg
ctggaaaataacccgctgcttgagcaaaccgatcttcatgacgaaatcgacactcagcaa
cctcaggataacgatcctctcgataccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgcttgacgccagttgggatgaaatttacaccgccgggacgccgtccggcccc
agcggcgattatatcgacgatgagctgcccgtctatcagggcgaaacgacgcagtcgttg
caggattatctgatgtggcaggttgagctaacgcccttctcggacaccgatcgcgctatt
gcgacatccattgtcgacgcggtagatgataccggctatctcaccgtatccctggatgaa
attcgcgaaagcatgggcgatgtagaggtggatctcgatgaggttgaagccgttctgaag
cgcattcagcgttttgatccggtaggcgtcgcggcaaaagatcttcgcgactgtctgctg
atccagctttcacaattcgacaaatccacgccgtggctggaaaaggcgcggctcattatc
tgcgatcaccttgatctgctggccaaccacgatttccgcacgttgatgcgcgttacccga
ctgaaagaagaggtgctgaaagaggcggtaaacctgattcagtcgctcgatcccagaccc
ggtcaatcgatccagaccggcgagccggagtacgttatcccggatgtgctggtacgcaag
cataacggtcgctggacggtggagcttaatagcgacagtattccccgtttacagattaac
cagcactatgccgccatgtgtaacagcgcgcgcaacgatgccgacagccagttcatccgc
agtaatttacaggatgcgaagtggctgataaaaagccttgaaagccgcaacgacacgctg
ctgcgcgtcagtcgctgcatcgtcgagcaacagcaagccttttttgaacagggcgaagaa
tatatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcacgaatccact
atatcccgcgtgaccacgcagaagtatttgcacagcccgcgcggtatttttgaactcaaa
tatttcttttccagccacgtcaataccgaaggcggaggcgaagcctcttccaccgcgatt
cgtgcgctggtgaagaagttaattgcggcggaaaaccccgcgaaaccactgagcgacagc
aagttaacctctctgctgtcagaacaaggtatcatggtggcgcgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccaacgcaaacagctggtttga
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integrated database retrieval system
