Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_3773
Help
Entry
SPC_3773 CDS
T00862
Name
(GenBank) putative inner membrane protein
KO
K21449
trimeric autotransporter adhesin
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sei02000
]
SPC_3773
Transporters [BR:
sei02000
]
Other transporters
Pores ion channels [TC:
1
]
SPC_3773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
ATG16
Motif
Other DBs
NCBI-ProteinID:
ACN47850
UniProt:
C0Q1T4
LinkDB
All DBs
Position
3818627..3822970
Genome browser
AA seq
1447 aa
AA seq
DB search
MNRIFKVLWNAATGTFVVTSETAKSRGKKNGRRKLAVSALIGLSSIMVSADALANAGNDT
GDGVTPTGTQTGGKGWIAIGTDATANTYTNVDGASAAMGYKASAMGKWSTAIGSYSQSTG
DSSLALGVKSVSAGDRAIAMGASSSASGSYSMAMGVYANSSGAKSVALGYRSVASGATSS
ALGYQATASGDDSAAFGNGAKAVGTNSVALGSGSIAQEDNSVAVGNSTTQRQITYVAKGD
INSTSTDAVTGAQIYSLSQSVADRLGGGASVNSDGTVNAPLYEVGTGIYNNVGSALSALN
TSITNTEASVAGLAEDALLWDDSTSAFSASHTGNASKITNLAAGTLAADSTDAVNGSQLF
DTNEKVDQNTADITANTDSINQNTADITANTDSINQNTTDIAANTTSINQNTTDIATNTT
SINSLSDSVTTLTDDALLWDADTGAFSAKHNGSDSKLTNLAAGTLAADSTDAVNGSQLFA
TNENVSQNTTDIAANTTSINQNTTDIATNTTSINSLSDSVTTLTDDALLWDAASGAFSAK
HNGSDSKITNLAAGTLAADSTDAVNGSQLFATNENVSQNTTDIATNTTSINNLSNSVTTL
TDDALLWDAASGAFSASRNGSASKIINVAAGDLSEDSTDAVNGSQLYETNQKVDQNTSAI
ADINTSITNLSSDNLSWNETTSSFSASHGSSTTNKITNVAAGELSEESTDAVNGSQLFET
NEKVDQNTTDIAANTTNITQNSTAIENLNTSVSDINTSITGLTDNALLWDEDIGAFSANH
GGSTSKITNVAAGALSEDSTDAVNGSQLYETNQKVDQNTSAIADINTSITNLGTDALSWD
DEEGAFSASHGTSGTNKITNVAAGEIASDSTDAVNGSQLYETNMLISQYSESISQLAGDT
SETYITENGTGVKYIRTNDNGLEGQDAYATGNGATAVGYDAVASGAGSLALGQNSSSSIE
GSIALGSGSTSNRAITTGIRETSATSDGVVIGYNTTDRELLGALSLGTDGESYRQITNVA
DGSEAQDAVTVRQLQNAIGAVTTTPTKYYHANSTEEDSLAVGTDSLAMGAKTIVNADAGI
GIGLNTLVMADAINGIAIGSNARANHANSIAMGNGSQTTRGAQTDYTAYNMDTPQNSVGE
FSVGSEDGQRQITNVAAGSADTDAVNVGQLKVTDAQVSRNTQSITNLNTQVSNLDTRVTN
IENGIGDIVTTGSTKYFKTNTDGADANAQGADSVAIGSGSIAAAENSVALGTNSVADEAN
TVSVGSSTQQRRITNVAAGVNNTDAVNVAQLKASEAGSVRYETNADGSVNYSVLNLGDGS
GGTTRIGNVSAAVNDTDAVNYAQLKRSVEEANTYTDQKMGEMNSKIKGVENKMSGGIASA
MAMAGLPQAYAPGANMTSIAGGTFNGESAVAIGVSMVSESGGWVYKLQGTSNSQGDYSAA
IGAGFQW
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaatatttaaagtcctctggaatgccgctacgggaacatttgttgtcaccagc
gaaaccgcaaaaagccgcggcaaaaaaaacggccgcagaaagctggcggtttccgcactc
atcggtcttagcagcattatggtttctgcggatgcactggccaacgcaggaaacgataca
ggcgacggcgttactccaacgggtacccagactggaggaaaagggtggattgcaattggt
accgatgccacagccaatacttacaccaacgttgatggcgcaagcgccgcaatgggttat
aaagcctccgcgatggggaaatggagtaccgccattggttcctacagccagtccaccggc
gactcttcgttagcgcttggcgtaaaatcggtttctgccggtgaccgggccattgcaatg
ggcgcctcatcctcagccagtggaagttattcaatggcaatgggtgtgtatgccaattcg
agcggcgcaaaatcggttgcattaggttatagatctgtcgcgagcggagcaacttcctct
gcattaggttatcaagctactgcgagcggcgacgacagcgctgcttttggtaatggcgca
aaagcggtaggcaccaactcagttgcccttggctcgggctctatcgcccaggaagacaat
tccgtcgccgtgggtaacagcaccactcagcggcagatcacctacgttgctaaaggcgac
atcaattccaccagtaccgatgccgttacaggtgcgcaaatttattctttaagtcaatcc
gtcgccgaccgactcggcggaggggcttccgttaattctgatggtacagtgaatgcgccc
ctctacgaggtaggcacaggcatctacaataacgtaggcagtgcattaagcgcacttaac
acgtctatcactaacacagaggcctctgtcgcaggattagccgaagacgcgctgttgtgg
gatgacagcaccagcgcctttagcgctagccacacgggaaacgccagcaaaatcaccaat
ctggcggcaggcaccctggccgcagacagcaccgacgccgttaacggctcccagttgttt
gatacgaacgagaaagtggatcagaacactgctgatatcaccgccaataccgacagcatt
aaccagaacaccgctgatatcaccgccaataccgacagcatcaatcagaacaccactgat
atcgccgccaatacgaccagcatcaatcagaacactactgatatcgccaccaacaccacc
agtatcaacagcctgagcgactccgtcaccacgctcaccgatgatgccctgttatgggat
gctgacactggcgcattcagcgctaagcacaacggaagcgacagcaagttaaccaatctg
gcggcgggtaccctggctgcggacagcaccgacgccgttaacggctctcagttgtttgcc
accaacgaaaatgtgtcgcagaacacaaccgatatcgctgccaacaccaccagcatcaat
cagaacaccactgatatcgccaccaacaccaccagtatcaacagtctgagcgactccgtc
accacgctcaccgatgatgccctgctttgggatgcagcctctggcgcattcagcgctaag
cacaacggaagcgacagcaaaatcaccaatctggcggcgggtaccctagccgctgacagc
accgacgccgttaacggctcccaattgtttgccaccaatgaaaatgtgtctcagaacacc
actgatatcgccaccaacaccaccagcatcaacaacctgagcaattccgtcaccacgctc
actgacgatgccctgctatgggatgcagcctctggcgcattcagcgctagccgcaacgga
agcgccagtaaaatcatcaatgtcgccgccggggacctttctgaagacagtacagacgcg
gtgaacggctctcagttgtatgaaaccaaccagaaggtggatcaaaacacctctgctatt
gcagatattaatacgtccatcaccaatcttagctctgacaacctgagctggaatgagaca
acgagttcgttctctgccagccacggaagtagtacgacaaacaaaatcaccaacgttgct
gccggagagctgtctgaagaaagtaccgacgccgttaacggatcgcagctgttcgaaacc
aatgaaaaagtggatcagaacacgaccgatatcgccgccaataccactaacatcactcag
aacagcaccgcgattgagaacctgaatacttctgtctccgacattaatacgtccattacc
ggcctcactgataacgctctgttatgggacgaagacatcggcgctttcagcgcaaaccac
ggtggaagcaccagtaaaataaccaatgtcgccgccggggcgctttctgaggacagtaca
gacgcggtaaacggctcacagttgtatgaaaccaaccagaaggtggatcaaaacacttct
gctatcgcggatatcaatacgtccatcactaatcttggtaccgatgcactgagctgggat
gacgaagaaggcgcgttcagcgccagccacggtaccagcggtaccaataagataaccaat
gtagcagcaggtgaaatcgccagtgacagtactgacgctgttaatggctctcagctctat
gaaactaacatgctgatttctcagtatagtgaatctattagccaactagccggcgatacc
agcgaaacctatatcacggaaaatggtaccggcgtgaaatacatccgtacgaatgataac
gggcttgaaggccaggatgcatacgcaacgggtaacggcgcaacggcagtaggttacgac
gccgtcgcctctggcgctggcagtctggctcttggccaaaacagcagcagcagcattgag
ggcagtatcgctttgggcagtggctccacctctaaccgcgctattacaaccggtatacga
gaaacgagcgcaacaagcgatggcgtcgtcattggctacaatacaacagacagagagttg
ctgggcgcgttgtcattggggacggatggagaaagctatcgtcaaattaccaacgttgct
gacggctctgaagcgcaagatgcggtaacagttcgtcagttacaaaatgccattggtgcg
gtcactactacaccgaccaagtactaccacgcaaactcaacggaagaagattcactggct
gtcggaactgactcactggcaatgggtgcgaagaccatcgtcaatgctgatgcaggtatt
ggtattggtctgaatacactggtgatggctgatgccatcaacggtattgctatcggttct
aacgcacgcgccaatcatgcaaacagtattgcaatgggtaatggttctcagaccactcgc
ggcgcacagactgactacaccgcctacaacatggacacaccgcagaactctgtcggtgag
ttctctgtcggcagtgaagacggtcaacgtcagatcactaacgtcgcggcgggttcggca
gataccgatgccgttaacgttggtcaattgaaagtaacggacgcgcaggtttccaggaat
acccagagcattactaacctgaatactcaggtatcgaatctggatacccgcgtcaccaat
atcgaaaacggcattggcgatatcgtcactaccggtagcaccaagtacttcaagaccaac
accgatggcgcagatgcaaatgcccagggtgcggacagcgtcgcgattggctctggctct
attgctgccgctgaaaacagcgtggcgttaggtacaaattccgtcgcagatgaagctaat
actgtgtctgtcggctcttctactcaacaacgccgtattaccaacgttgccgcaggggtg
aacaacactgacgcggttaatgtggcgcaactgaaagcctcagaagcaggctccgtgcgt
tatgaaaccaatgcagatggctcggttaactatagcgtgctcaacctgggagacgggagt
ggcggcaccactcggatcggcaatgtttcagcggcggtgaatgatacggatgcggttaac
tatgcgcaattgaaacgcagcgtcgaagaagcaaacacctataccgaccagaaaatgggt
gaaatgaacagcaaaatcaaaggggtagaaaacaagatgagcggcggtatcgcttcagcg
atggcgatggccggtctgccacaagcctacgccccgggcgccaacatgacctcgattgct
ggcggtacgtttaatggtgaaagtgccgtcgccattggtgtctccatggtaagtgaaagc
gggggctgggtgtataaactgcaaggaaccagcaacagccagggcgattactctgcagcc
attggcgcgggcttccagtggtaa
DBGET
integrated database retrieval system