Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_3778
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Entry
SPC_3778 CDS
T00862
Name
(GenBank) putative lacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sei03000
]
SPC_3778
Transcription factors [BR:
sei03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SPC_3778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_31
HTH_3
AbiEi_4
HTH_IclR
HTH_35
Motif
Other DBs
NCBI-ProteinID:
ACN47855
UniProt:
C0Q1T9
LinkDB
All DBs
Position
complement(3827490..3828545)
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AA seq
351 aa
AA seq
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MMNNARINQPIFAGASDVKRTKSPRAPTLEDVARSAGLSPMTVSRALNSPQLVRPKTVEK
VMQAVRVTGYIPNALAGGLASRRSKLIAVVVPQINNNMFVDTIQSLSDELARRGYHILLC
VAGYTEQTEAELVATLLSRRPDGVVLTGIHHTIELKKVILNAAIPVVEIWDLTPTPLDML
VGFSHEKVGQATGEYLLSKGYRRPGLLWTADRRAAQRKQGLCSVLQRHAIHAVPQVDVPL
PASLSLGRSGLSQLFDEGTFDVIVCSSDTLAQGAMMEAESRGLRIPHDLAVIGFGDLDFA
ASNRPSITTVSVDRRAIGQRAATLLADRIEQKPCAEAIVDIGFHLIERESA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataatgcgcggataaatcagccaatctttgcaggggcatcagacgtgaagaga
accaaatcacctcgtgcgccgacgctggaagatgtagcacgtagcgccgggctgtctccg
atgacagtcagccgggcattgaattcgccacaactggttcgccccaaaacggttgagaaa
gtcatgcaggcggttcgcgtcacaggctacatacccaacgcgttagccggtggtctggcg
tcgcgacggagtaaattaatcgctgtcgtcgtgccgcaaattaacaacaacatgtttgtc
gataccatccagtcgctgagcgatgaactggcccgacgcggatatcacatattgctgtgc
gtggcgggatataccgaacaaacggaagcggagttggtggcgacactgctttcccgccgc
cccgatggcgtggtgcttaccgggatccatcacacgatagaactgaaaaaggtcatcctg
aacgcggctattccggtggtggaaatttgggacttaacgcccacgccgcttgatatgctg
gtcggtttttcccatgaaaaagtcgggcaggcgacgggggagtatcttctgagtaagggc
tatcgtcgtcccggcttgttgtggaccgccgatcgccgagccgcgcaacgtaagcagggg
ttatgtagtgttcttcaacgccacgctattcatgccgtaccgcaggtagatgtccccctt
ccggcatcgctttcgctggggcgcagcggtttaagccagctttttgacgaagggacgttt
gatgtcattgtttgcagttctgataccctggcacagggggcgatgatggaggcggaaagc
cgtggtttgcgcatcccgcatgatttagcggttattggttttggcgaccttgattttgcc
gccagcaatcgaccgtcaattactaccgtaagcgttgacagacgcgccattggtcagcgc
gccgctacgctgttggccgatcgtattgaacagaaaccgtgcgcagaagctattgtggat
attggctttcatttgattgagcgagagtccgcataa
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