Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_4039
Help
Entry
SPC_4039 CDS
T00862
Symbol
rffA
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei00541
Biosynthesis of various nucleotide sugars
sei01100
Metabolic pathways
sei01250
Biosynthesis of nucleotide sugars
Module
sei_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SPC_4039 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sei01007
]
SPC_4039 (rffA)
Enzymes [BR:
sei01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
SPC_4039 (rffA)
Amino acid related enzymes [BR:
sei01007
]
Aminotransferase (transaminase)
Others
SPC_4039 (rffA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
OKR_DC_1
Beta_elim_lyase
GCD14
Androglobin_V
Motif
Other DBs
NCBI-ProteinID:
ACN48106
UniProt:
C0Q3A4
LinkDB
All DBs
Position
4108820..4109950
Genome browser
AA seq
376 aa
AA seq
DB search
MIPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHFGSAKVLLTPSCTASLE
MAALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKT
RAIVPVHYAGVACEMDVIMALADKYNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET
KNYTAGGEGGATLINDRTLIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA
AYLWAQLEAADRINQQRLSLWQTYYDALTPLARAGRIELPSIPENCGHNAHMFYIKLRDI
ADRSALINFLKEAEIMAVFHYIPLHDCPAGDKFGEFIGDDVYTTKESERLLRLPLFYNLA
PVDQRTVITTLLNYFS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattccttttaatgcgccgccggtggtgggaaccgaactcgaatacatgcagtctgca
atgagcagcggcaaactgtgcggcgacggcggctttacgcgtcgttgccagcagtggctg
gagcaacatttcggcagcgcgaaggtgttgctaacgccttcctgtaccgcatcgctggag
atggcggctctgttgttggatattcagcccggcgatgaagtgatcatgccgagctttacg
tttgtctccactgctaacgcttttgtcctgcgcggcgcgaaaattgtgtttgtcgatatt
cgtccggatacgatgaatattgacgaaacgctgattgaggcggcgattactgataaaacc
cgcgctatcgtgccggtacactacgctggcgtcgcttgtgaaatggacgtcatcatggcg
ctggcggataagtataatctgttcgttgtcgaggatgccgcccagggtgtgatgtccacg
tacaaagggcgcgcattagggacgatcggtcacatcggctgttttagcttccatgaaacc
aaaaattacaccgctggcggcgaaggcggcgcgacgctgatcaacgatcgtacgctaatt
gaacgcgcggagatcatccgcgaaaaaggcaccaaccgtagccagttcttccgtggtcag
gtggacaaatacacctggcgggatatcggctccagttatttgatgtccgatctgcaggct
gcctatctgtgggcgcaactggaggccgccgatcgtatcaatcaacagcgtctgtcgctg
tggcagacttactacgatgcgttaacgccgctggcgcgcgccgggcgtatcgagctgcct
tctattccggaaaactgcgggcataatgcccacatgttttacatcaaactgcgagatatc
gccgatcgcagcgcgctgattaattttctgaaagaggcggaaatcatggcggtattccat
tacattccgttgcatgattgtccggcgggcgataaattcggcgagtttatcggggacgat
gtctacaccacaaaagagagcgaacgtttgctgcgtctgccgctgttttataaccttgcg
cccgtcgatcaacgaacggtgattactaccttgctaaattatttctcctga
DBGET
integrated database retrieval system
