Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_4058
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Entry
SPC_4058 CDS
T00862
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei03420
Nucleotide excision repair
sei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPC_4058 (uvrD)
03430 Mismatch repair
SPC_4058 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sei03400
]
SPC_4058 (uvrD)
Enzymes [BR:
sei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPC_4058 (uvrD)
DNA repair and recombination proteins [BR:
sei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPC_4058 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SPC_4058 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACN48124
UniProt:
C0Q3C2
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All DBs
Position
4129140..4131302
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVENNSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQM
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPLAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgcgaagcggtggccgcg
ccacgtagcaacatgctggtgttggcgggcgcgggaagcgggaaaacccgcgtgctggtg
caccgtatcgcctggttactgagcgtagaaaacaactcgccatattccatcatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccatcgtattggccagttgatggggacc
agccagggtggaatgtgggtagggacgttccacggtctggcgcaccgcctgctgcgcgcg
catcatatggacgctaatttgccgcaggatttccagattctcgacagcgaagatcagatg
cgtttgcttaaacgcctgattaaggcgatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaatagccagaaagacgaagggctacgcccgcaccatattcaa
agctatggcaacccggtggaacagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgcgctggtctggtggatttcgccgagctactgctgcgcgctcatgaactatgg
ctgaacaagccgcacatcctgcaacactatcgcgagcggtttactaacatcctggtggac
gaattccaggataccaacaacattcagtacgcctgggttcgtctgctggcgggcgatact
ggtaaggtgatgattgtcggcgacgatgaccagtcgatctacggctggcgcggggcccag
gtagagaacatccagcgcttcctcaatgatttccccggcgcgcagaccattcgtctggag
cagaattaccgctcgaccagcaacatccttagcgcggcgaacgctctgattgaaaacaac
aacgggcgtttgggtaaaaagctgtggactgacggcgttgacggcgaaccgatatctctg
tactgcgctttcaacgaactggatgaagcgcgctttgtggttaaccgtatcaaaacctgg
caggacaacggcggcgcgcttgcgcaatgcgccatcctttatcgcagcaacgcccagtcg
cgcgtgctggaagaagcgttattacaggccagtatgccgtaccgcatttacggcggtatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcttatctgcgtttgattgccaat
cgcaacgatgatgccgcctttgaacgcgtggtgaataccccaacgcgcggcatcggtgac
cgcacgctggacgtggtgcgccagacctcgcgcgatcgccagctaacattgtggcaggcg
tgccgtgaattgttacaggaaaaagccctggccgggcgtgcggccagcgcgctgcaacgc
tttatggaactgatcgacgccctggcgcaggaaactgccgacatgccgctgcatgtgcag
actgaccgggtgatcaaagattccggcctgcgcaccatgtatgagcaagaaaaaggcgag
aaaggccagacgcgcatcgaaaacttagaggaactggtgacggcgacgcggcagttcagc
tacaacgacgaagatgaagatttgatgccgttgcaggccttcctctctcacgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtacagctgatgacgctgcac
tcggccaaagggctggagtttccgcaggtgtttatcgtcggcatggaagagggcatgttc
cccagccagatgtcgctggatgagggcgggcgtttggaagaggagcgtcgtctggcctac
gtcggcgttacccgtgccatgcagaaactgacgctaacctatgccgaaactcgccgtctg
tacggtaaagaggtctaccatcgcccgtcgcgttttatcggcgagttgccggaggagtgc
gtggaagaggtccgtctgcgcgccaccgtcagtcgtccggtgagccatcaacgaatggga
acgccgctggcggaaaacgacacaggctacaaactcggccaacgcgtgcgccatgcgaag
ttcggcgagggaactattgtcaacctggagggcagcggcgagcatagccggttgcaggtg
gcttttcaggggcaagggatcaaatggctggttgccgcgtatgcgaagctggaaacggtt
tga
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