Slackia exigua: M1L65_01445
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Entry
M1L65_01445 CDS
T11352
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
seig Slackia exigua
Pathway
seig03030
DNA replication
seig03430
Mismatch repair
seig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M1L65_01445 (dnaE)
03430 Mismatch repair
M1L65_01445 (dnaE)
03440 Homologous recombination
M1L65_01445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seig03032
]
M1L65_01445 (dnaE)
03400 DNA repair and recombination proteins [BR:
seig03400
]
M1L65_01445 (dnaE)
Enzymes [BR:
seig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M1L65_01445 (dnaE)
DNA replication proteins [BR:
seig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M1L65_01445 (dnaE)
DNA repair and recombination proteins [BR:
seig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M1L65_01445 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
XQM00752
LinkDB
All DBs
Position
330751..334269
Genome browser
AA seq
1172 aa
AA seq
DB search
MSFVHLHNHTEYSMLDGATHVKDMVRRAADLDMPAVAITDHGVMCGVPELCDACAAVERE
TGKKVKPIYGCEIYFTEDPEVGTKKRSPLYHMIMLAKNSEGYHNLLHLVSESHMDNYYYK
PRTTLDMIKKHAKGIVATSACIAGIIPRRLRERDVAGAREWAQTFKDIFEPGDFYIELQD
QGISTEEGFSQHELNVQLSNLAHDLGLETIATNDFHYLTREDAKAQDIMLCIGTGSNYDD
ENRMRFANDEFYMKTEEEMREALCDFPEACDNTVKVAEKCSVELERDSILPRFPLPEGYT
EEMLFREECEKGLIHRYGNNGEITTMDELRAARPDVVERYEYEAGVIIQQGFPAYFLIVQ
EYIRWAKDNGIGVGPGRGSAAGAICTYAMGITDLEPLDNGLLFERFLSPERVEMPDIDVD
FDDQHRQDVIDHVRDFYGADHIAGVITFGKLQAKNAVRDAARVLGHPYGVGDKICKTIGD
ELGITLDDALENNVDLKKMYDDDADTRDIIDAARSIEGNIRGEGVHACATIICRDPLVDH
VPVKRDTKGGGMITQYDGHYTPELGLLKMDFLGLRTLGVLSRACKNVKARHGLEIRPDEI
PIEDAEAFRLMRGEMRWGMDGLFQVEGALYVSLFSRLPPRRFSDIVASIALNRPGPLESG
MVDDYVKVANGTTEIHYYDDRLRPILEETYGTMVYQEQIMQISMAMSGFSAGKADRLRKA
MGKKKLDIMRQLQADWNEGAVENGYSLEIAKQIWEDAEKFAKYAFNKSHSAAYALLVMRT
AYLKAHYPYEFMAAVLSSYMGNADRLIKYISSCTHSGIPVLPPDVNTSNLEFTPLEEGIR
FGLAGVRGIGEAVAQSIIDEREANGPYSSLHDFVNRLDAKCYNRKTLEALVKSGAFDSTG
YTRKQLMHFIDDTPLLESAAKRQKDRDAGQVSMFDLFADVPDSGFDDDVPAPDGIEWDKR
MLLAYEKEILKIYVSDHPLRPYERSLQSVTKYHLGDLAEHKGDIKNAVFAGLVASVTVKM
TRKGTKMANFDLEDTTGHMECVCFKYSDFEEAIQEDAIVKIKGRFEHSERGDQILAFEVE
RLDMDSMRETPSNLQISLAAADFDQSVATRLYGILGDYPGNDPVVLYVEQSDGRKFRAEL
PIKVDAADNLLYSGIMTLFGRPVWKSLQEQRR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgtccacctgcataatcacaccgagtattcgatgctcgacggcgccacgcac
gtgaaggacatggtgcgtcgcgcggccgacctcgatatgcccgccgtcgccatcaccgac
cacggcgtgatgtgcggcgtgcccgagctgtgcgacgcctgcgcggcagtcgagagggaa
acgggcaagaaggtcaagcccatctacggctgcgagatctatttcaccgaagatcccgag
gtaggcacgaagaagcgctctccgctctatcacatgatcatgctcgccaagaactccgag
ggctatcacaatctgctgcatctcgtgtccgagtcgcatatggacaattactattacaag
ccccgcacgacgctcgatatgatcaagaagcatgcgaagggcatcgtcgcgacgagcgcc
tgcatcgccggcatcatcccccggcgtctgcgcgagcgcgatgtcgcgggggcacgggag
tgggcccagacgttcaaggacatcttcgagccgggggatttctatatcgagcttcaggat
cagggcatctccacggaagagggcttctcccagcacgagctgaacgtgcagctttcgaac
cttgcccatgatctggggctcgaaaccatcgccacgaacgacttccattacctgacgcgc
gaagacgccaaggcgcaggacatcatgctgtgcatcggcacggggtcgaactacgacgac
gagaaccgcatgaggttcgcgaacgacgagttctacatgaagaccgaggaagagatgcgc
gaggccctgtgcgatttccccgaggcctgcgacaacacggtcaaggtcgccgagaaatgc
tccgtggagctcgagcgcgattccatccttccgcgtttcccgttgcccgaaggctacacc
gaggagatgctcttccgcgaggaatgcgagaaggggctcatccaccgctacggcaacaat
ggcgagatcacgacgatggacgagctgcgcgccgcgcgccccgacgtggtcgagcgatac
gaatacgaagccggcgtcatcatccagcagggatttcccgcctacttcctcatcgtgcag
gaatacatccgctgggcgaaggacaacggcatcggcgtcggtccggggcgcgggtcggcc
gcgggtgccatctgcacgtacgcgatgggcatcactgatctggaacctctggacaacggg
ctgctgttcgaacgcttcctgtcgcccgaacgcgtggagatgcccgatatcgacgtcgac
ttcgacgatcagcaccgccaggacgtcatcgaccacgtgcgcgatttctatggggccgac
catatcgcgggtgtcatcacgttcggcaagctgcaggcgaaaaacgccgtgcgcgacgcc
gcgcgcgtgctcggacacccctatggcgtgggcgacaagatctgcaagaccatcggcgac
gagctcggcatcacgctcgacgacgctctggagaacaacgtcgacctcaagaagatgtac
gacgacgatgccgacacgcgcgacatcatcgatgcggcacgttccatcgagggcaacatc
cgcggcgagggcgtgcatgcctgcgcgacgatcatctgccgcgaccccttggtcgatcac
gtgcccgtgaagcgcgacaccaagggcggcggcatgatcacccagtacgacggccactac
acgcctgaactgggcctgctcaaaatggacttcctgggcctgcgcacgctgggcgtgctg
tcgcgcgcctgcaagaacgtgaaggcgcgccacggtctcgaaatccgtcccgacgagata
cccatcgaagacgccgaggcgtttcgtctcatgcgcggcgagatgcgctggggcatggac
ggcctgttccaggtcgaaggcgcgctctatgtgagcctgttcagcaggcttccgccgcgt
cggttctccgatatcgtcgcctccatcgcgctcaaccgtccgggcccgctcgaatcgggc
atggtcgacgactacgtcaaggtggcgaacggcacgaccgagatccattactacgacgat
cgtctgcgccccatcctggaagagacctacggcacgatggtctaccaggagcagatcatg
cagatctcgatggctatgagcgggttctcggccggcaaggccgatcgcctgcgcaaggcc
atgggcaagaagaagctggatatcatgcgccagcttcaggccgattggaacgaaggggcc
gtcgagaacggctattcgctcgaaatcgcgaagcagatctgggaagacgccgagaagttc
gcgaagtacgcgttcaacaagtcgcattccgcggcctacgccctgctcgtcatgcgcacg
gcgtatctgaaggcgcactatccgtatgaattcatggcggccgtgctttccagctacatg
ggcaacgccgatcgtctcatcaagtacatctccagctgcacgcattcgggcattcccgtg
ctgccgcctgacgtgaacacgtcgaatctcgaattcacgccgcttgaggagggcatccgc
ttcgggcttgccggcgtgcgcggcatcggcgaggcggtggcgcagtccatcatcgacgag
cgcgaggccaacggtccgtattcgagcctgcacgacttcgtgaaccgcctggatgcgaaa
tgctataaccgtaaaacgctcgaagcgctggtgaagtcgggtgcgttcgattcgacgggg
tacacgcgcaagcagctcatgcacttcatcgacgacacgccgctgctcgaatccgccgcg
aagcgccagaaggatcgcgatgccggccaggtgagcatgttcgacctgttcgccgatgtg
cccgacagcgggttcgacgacgatgttccggcgccggacggcatcgagtgggacaagcgc
atgctgctcgcctatgagaaggagatcctcaagatctatgtctccgaccatcccctgcgt
ccgtacgaacggtcgctccagtcggtcacgaagtaccacctgggcgatcttgcggagcac
aagggcgatatcaagaacgccgtgttcgcggggctcgtggcaagcgtcaccgtcaagatg
acgcgcaagggcaccaagatggcgaacttcgatctcgaagacacgacgggccatatggag
tgcgtctgcttcaagtacagcgacttcgaagaagccatccaggaagacgccatcgtcaag
atcaagggccggttcgagcattccgagcgcggagaccagatcctcgccttcgaagtggaa
cgcctggatatggacagcatgcgcgagacgccgagcaacctgcagatctcgctcgccgct
gccgacttcgaccagtccgtcgccacgcggctctacggcatactcggggactatccgggc
aacgatcccgtcgtcctgtacgtggagcagtccgacgggcgcaagttccgcgccgagctt
ccgatcaaggtcgatgcggccgataacctgctttattcgggcatcatgacgctcttcggg
cgcccggtgtggaagagcctgcaggagcagaggagatag
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