Salmonella enterica subsp. enterica serovar Typhimurium UK-1: STMUK_0186
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Entry
STMUK_0186 CDS
T01743
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sej
Salmonella enterica subsp. enterica serovar Typhimurium UK-1
Pathway
sej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STMUK_0186 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sej03019
]
STMUK_0186 (pcnB)
Enzymes [BR:
sej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
STMUK_0186 (pcnB)
Messenger RNA biogenesis [BR:
sej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
STMUK_0186 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
PhoR
Motif
Other DBs
NCBI-ProteinID:
AEF06119
UniProt:
A0A3Z2F8M8
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All DBs
Position
complement(213868..215286)
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AA seq
472 aa
AA seq
DB search
MTLPRCAIFTRVANFCRKVLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVLY
RLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMHISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGNGYETYQQLREYHLFQPLFPTITRYFTENGDSAMER
IIAQVLKNTDNRIRNEMRVNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNDVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLELRAQVENN
TELQRLAQWWAEFQASAPPEQKGMLNELDDDPAPRRRRSRPRKRAPRREGTV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacactaccgaggtgcgctatttttacccgagtcgctaatttttgccgtaaggtgtta
agccgcgaggagagcgaggcagaacaagccgtcgcccgtccacatatgacgattatcccg
cgtgaacagcacgctatctcccgcaaagatatcagtgaaaatgccctcaaggtactgtac
aggctgaacaaagcgggctatgaagcctacctggtcggcggcggcgtccgcgatctcctg
ctcggcaaaaagccgaaggatttcgacgtgactaccaacgcaacaccggatcaggtacgg
aaattattccgcaattgccgtctggtgggacgtcgtttccgcctggctcacgtgatgttt
ggcccggaaattatcgaagtggcaacgtttcgtggtcatcatgaaggcagtgaaagcgac
cgtacgacctcccagcgtgggcaaaacggtatgctgctgcgcgacaacatcttcggctct
atcgaagaagatgcccagcgccgcgatttcaccatcaacagcctttactacagcgtggcg
gattttaccgtgcgcgattacgtcggcgggatgcaggatctgcaagaaggcgtgattcgc
ctgatcggcaatccggaaacgcgctaccgcgaagatccggttcgaatgctgcgcgccgtg
cgtttcgctgcgaagctcaatatgcatatcagccctgaaacggctgagccaatcccgcgt
ctggcaaccttgctaaacgacattcctcccgcgcgcctgttcgaagagtcgctgaagctg
ttgcaggcggggaacggttacgaaacctatcaacaactgcgggaataccacctcttccag
ccgttgtttcctaccattacgcgttatttcaccgaaaacggcgacagcgcaatggaacgc
atcattgcgcaggtgttgaagaatacggataaccgcatccgtaacgagatgcgcgttaat
ccggcatttttgtttgccgccatgttctggtatccgctgctggagatggcgcaaaaaatc
gctcaggagagcggtctggcctattacgacgctttcgcgctggccatgaatgatgtgctg
gatgaggcctgccgttcactggcgatcccgaaacgccttaccacgcttacccgtgatatt
tggcagcttcagttacgcatgtcgcgacgtcagggcaaacgcgcctggaaactgatggaa
catcccaaattccgcgccgcgtttgatttactggagctgcgcgctcaggtggaaaataat
actgaactgcaacgtctggcgcagtggtgggccgagtttcaggcttccgcgccgccggaa
caaaaagggatgctcaacgagctggacgacgatcctgctccacgccgccgtcgttcacgt
ccgcgcaaacgcgcgccgcgccgcgagggcaccgtatga
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