Salmonella enterica subsp. enterica serovar Typhimurium UK-1: STMUK_0715
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Entry
STMUK_0715 CDS
T01743
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sej
Salmonella enterica subsp. enterica serovar Typhimurium UK-1
Brite
KEGG Orthology (KO) [BR:
sej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sej03400
]
STMUK_0715 (phrB)
Enzymes [BR:
sej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
STMUK_0715 (phrB)
DNA repair and recombination proteins [BR:
sej03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
STMUK_0715 (phrB)
Prokaryotic type
STMUK_0715 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEF06629
UniProt:
A0A3Z6P5F5
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All DBs
Position
775274..776695
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AA seq
473 aa
AA seq
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MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPRQAAFISAQLN
ALQTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKT
LPSVICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVPAPKIRVSGA
LSTPLTPVSLNYPQQAFDAALFPVEENAVIAQLRQFCAQGADEYALRRDFPAVDGTSRLS
ASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLMTWYPALCKHQPFI
RWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQW
LPALRDIPGKAIHEPWRWAEKAGVVLDYPRPIVEHKQARIATLSAYEAARKGA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccatttagtctggttcaggcgcgatctgcgtttacaggataaccttgcgctg
gccgccgcctgccgcgatgcatccgcgcgggtgctggcgctttatatttccacccccgcg
cagtggcaggcccatgatatggcgccgcggcaggcggcattcatcagcgcgcagctcaat
gcgctacagacggcccttgcagagaaaggcattccgttgctgtttcatgaagtggcggat
tttaacgccagtattgaaacggtcaaaaacgtttgccgacagcatgacgtcagccatctg
ttttataactatcagtatgagtttaacgagcgtcagcgtgatgcggcggtggaaaaaacg
ctgccctctgtcatctgcgaaggctttgacgatagcgtgattctggcgcccggcgcggtg
atgaccggcaatcatgaaatgtataaagtttttacgccgtttaaaaatgcctggttgaaa
cggctaaaagaagatatcccgccgtgcgttccggccccgaagatccgggtgagcggcgcg
ctttctacacccttaacgccagtctcgcttaactacccgcaacaggcgtttgacgccgcg
cttttcccggtggaagaaaacgcggtcatcgcgcagctacgtcagttttgcgcgcagggc
gcagacgagtatgcgttacggcgcgatttccctgcggttgacggcaccagtcggctttcc
gccagcctggcgacgggcggcctgtcgccgcgacagtgcctgcaccgattactggcggag
cagccgcaggcgctggacggcgggccgggaagcgtctggttgaatgagctcatctggcgg
gaattttaccgtcatttaatgacctggtatccggcattatgcaaacaccagccgtttatc
cgctggacaaaacgcgtcgcgtggcaggaaaacccgcactattttcaggcatggcagaaa
ggcgaaaccggttatcccattgtcgatgcggcgatgcgccagcttaacgcgacgggctgg
atgcataaccgtttacgcatgattaccgccagctttctggtaaaagatctgttgattgac
tggcggttgggggagcgctatttcatgtcgcagcttattgacggcgatcttgccgccaat
aatggcggctggcagtgggccgcctcaaccggtactgacgccgcgccttattttcgtatt
tttaatcccacgactcagggagagaggttcgatcgcgacggcgaatttatccgccagtgg
ctaccggcattacgcgatatccctggaaaagcgattcacgagccgtggcggtgggcggaa
aaagcgggagtcgtgcttgattatcctcggcctattgtggagcacaaacaggcgagaatc
gcaacgctttccgcctatgaggcggcgagaaaaggggcgtga
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