Salmonella enterica subsp. enterica serovar Typhimurium UK-1: STMUK_1169
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Entry
STMUK_1169 CDS
T01743
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sej
Salmonella enterica subsp. enterica serovar Typhimurium UK-1
Pathway
sej03030
DNA replication
sej03430
Mismatch repair
sej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STMUK_1169 (holB)
03430 Mismatch repair
STMUK_1169 (holB)
03440 Homologous recombination
STMUK_1169 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sej03032
]
STMUK_1169 (holB)
03400 DNA repair and recombination proteins [BR:
sej03400
]
STMUK_1169 (holB)
Enzymes [BR:
sej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STMUK_1169 (holB)
DNA replication proteins [BR:
sej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STMUK_1169 (holB)
DNA repair and recombination proteins [BR:
sej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STMUK_1169 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
DUF6869
Motif
Other DBs
NCBI-ProteinID:
AEF07075
UniProt:
A0A3Z2F5N3
LinkDB
All DBs
Position
1241716..1242720
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AA seq
334 aa
AA seq
DB search
MKWYPWLRPAYEKLVESYQAGRGHHALLIQALPGMGDEALCYALSRYLLCQQPEGHKSCG
HCRGCQLMQAGTHPDYYTLTPDKGKSSLGVDAVREVSEKLYEHSRLGGAKVVWIADAALL
TDAAANALLKTLEEPPEQTWFFLASPEPARLLATLRSRCRLHHLAPPSESYAMSWLSREV
TASQEALLTALRLNAGSPGAALALLQSERWAQREALCQALMDSLHTGDWYAVLTALNHEQ
APARLHWLATLLVDALKRQHGASYLTNVDADAVVAALAGPLSPARIQAILNDVCHCRDQL
LHVTGLNRELVLTDLILRIEHYLQPGTLLPVPHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccatggttacggcccgcctatgaaaaactggtagaaagttaccaggcg
ggacgtgggcaccatgcgctactgattcaggccttacctggcatgggcgacgaggcgctg
tgctatgcgctgagccgttatctgttatgccagcagcctgagggccacaaaagctgtggg
cattgccgtggctgtcagcttatgcaggctggcacgcatccggactattacacgctgacg
ccggataaaggcaaaagcagcctcggcgtagatgcggtacgcgaggtcagcgagaaattg
tacgagcactcccgtctgggcggcgcgaaggtggtgtggattgcggatgcggcgctatta
accgacgccgccgccaatgcgttgctcaaaacgctggaagagccgccggagcaaacctgg
tttttccttgccagcccggagcctgctcgtctgttggcgacattacgcagccgctgccgg
ctgcatcatctggcgccgccgtccgaatcgtatgcgatgtcatggctgtcgcgagaagtg
acggcgtcacaagaagcattgctcacggcgctacgtctgaatgcggggtcgcccggcgcc
gcgctggcgctgttgcagtctgaacgctgggcgcagcgtgaggcgctgtgtcaggcgtta
atggacagtttgcatacgggcgactggtatgcggtattaacggcgctcaatcatgagcaa
gccccggcgcgcctgcactggctggcgacgctgctggtagacgcgctgaaacgtcagcac
ggcgcgtcgtacctgacaaacgttgatgcggacgcggttgttgccgcgctggcggggccg
ctatccccggcgcgtattcaggcaatcctgaacgatgtttgccattgtcgtgatcaatta
cttcatgtgaccggattaaaccgcgaactggtattaaccgatctcattctccgcatcgag
cattacctgcaaccaggcaccttgttgcctgttcctcatctttga
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