Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601: SSPA1081
Help
Entry
SSPA1081 CDS
T00756
Name
(GenBank) DNA topoisomerase I, omega protein I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sek
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Brite
KEGG Orthology (KO) [BR:
sek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sek03032
]
SSPA1081
03400 DNA repair and recombination proteins [BR:
sek03400
]
SSPA1081
Enzymes [BR:
sek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SSPA1081
DNA replication proteins [BR:
sek03032
]
Prokaryotic type
DNA Topoisomerases
SSPA1081
DNA repair and recombination proteins [BR:
sek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SSPA1081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
MetOD1
Motif
Other DBs
NCBI-ProteinID:
CAR59235
UniProt:
A0A6C7HYV0
LinkDB
All DBs
Position
1223795..1226392
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDARYSRVVFNEITKNAIRQAFEQPGELNINRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTTTPSGEALPLQVTH
QNDKPFRPVNREQTLAAVSLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIGDNFGKKYLPDNPNQYASKEN
SQEAHEAIRPSDVAVMAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGEF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDALTLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDQVANHQAEWKAVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKDGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgactacgtggtgaaatccagcgtgggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgctctcgtcaaccgtatgggggttgacccgtggcacaactgggat
gcgcactatgaagtgctgcccggtaaagagaaggtcgtctctgaactgaaacagttggcg
gaaaaagccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcggcggcgatgacgcgcgctacagtcgcgtagtctttaac
gaaataaccaaaaatgccattcgtcaggcgtttgaacagccgggcgagctgaatattaac
agggtcaacgcccagcaagcgcgccgctttatggaccgcgtggtaggctatatggtctcg
ccgctgctgtggaaaaagatcgcccgtggtttgtcggcaggtcgcgttcagtctgtcgcg
gtccgtctggtcgttgagcgcgagcgcgagattaaagcgtttgttccggaagagttctgg
gaaattgacgctaatacgacgacgccgtctggcgaggcgctaccgctacaggtcacgcat
cagaacgacaagccattccggccggtaaatcgcgagcagacgcttgccgccgtcagcttg
ttggaaaaagcgcgctatagcgtactggagcgtgaagacaaaccgaccagcagcaaacct
ggcgcgccgtttatcacctccacgctacaacaggcggccagcacccggctgggctttggc
gtgaagaaaaccatgatgatggcgcagcgtctgtatgaggcgggctacatcacctatatg
cgtacagactccaccaacctgagtcaggatgcggtcaacatggtgcgtggttatattggc
gataatttcggcaagaaatacctgccggataacccgaaccagtacgccagcaaagaaaac
tctcaggaagcgcacgaagcgatccgtccttccgacgttgctgtcatggcggagtcgctg
aaagacatggaggctgacgcgcagaagttgtatcaactaatttggcgtcagtttgtcgcc
tgtcagatgacgccagcgcaatatgactctactacgcttaccgttggcgcaggcgaattc
cgtctgaaagcgcgtgggcgtattttgcgctttgacggctggacaaaagtgatgccggcg
ctgcgtaaaggcgatgaagatcgcacattgcctgccgtgaataagggcgatgcgctgacg
ctagttgaattgacgcctgctcagcactttactaaaccgccagcccggtttagcgaggct
tctctggttaaagagcttgagaagcgcggtattggtcgtccgtctacctatgcgtcgatt
atctcgaccattcaggatcgcggctatgttcgcgttgaaaaccgtcgcttctatgcggaa
aaaatgggtgaaatcgtcaccgatcggctggaagaaaacttccgcgaattgatgaactac
gattttaccgcgcagatggaagatagtctggatcaggttgcaaatcaccaggccgagtgg
aaagcggtactggataacttcttcagcgattttactcagcagctcgataaagccgagaaa
gatccggaagaaggggggatgcgtcctaaccagatggtgctgaccagcatcgactgtcca
acctgtggccgtaaaatgggaattcgtactgccagtacgggggttttccttggatgttca
ggttatgcgctttcgccgaaagagcgttgtaaaacgaccattaacctggtgccggaaaat
gaagttctgaacgtgctggaaggcgacgacgccgaaaccaacgccctgcgcgccaaacgt
cgctgtcagaagtgcggtacggcgatggacagctatctgatcgatccgaagcgtaaattg
catgtgtgtggtaataacccgacctgtgacggctacgagattgaagaaggcgagttccgc
atcaaagggtatgacggcccgatcgttgagtgtgagaaatgtggttccgaaatgcacctg
aaaatggggcgttttggtaagtacatggcctgtactaacgacgaatgtaaaaatacccgt
aagatcttgcgtaacggcgaagttgcgccgccgaaggaagatcctgttccattgccggaa
ctgccgtgtgaaaaatcggacgcgtactttgtgctgcgcgatggcgccgcagggatattc
ctggcggccaatacgttcccgaaatcacgcgaaacgcgcgcgccattagtcgaggagctt
taccggttccgcgatcgcctgccggaaaaactgcggtatctggcggatgcgccgcagcag
gatccggaaggtaataaaaccgttgttcgctttagccgcaaaacaaaacagcagtacgtt
gcggcggaaaaagacgggaaggcgacgggatggtcagcgttcttcgtcgacggcaagtgg
gttgaaggtaagaaataa
DBGET
integrated database retrieval system
