Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601: SSPA2662
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Entry
SSPA2662 CDS
T00756
Name
(GenBank) exonuclease V subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sek
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Pathway
sek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SSPA2662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sek03400
]
SSPA2662
Enzymes [BR:
sek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SSPA2662
DNA repair and recombination proteins [BR:
sek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SSPA2662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAR60904
UniProt:
A0A6C7I391
LinkDB
All DBs
Position
complement(2959399..2962944)
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AA seq
1181 aa
AA seq
DB search
MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAV
SELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDT
ALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMNDAFMFRDIPFSPVKF
APRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALL
TNGDSSRPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDTVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESIALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPMDAAGFRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARTLQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFE
ELDFTQPIDPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVE
MEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMTNYDYERHFGGVIY
LFLRGVDSERPQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtcgccgagactcttgatcctctacgcttgcccctgacaggcgagcgtctg
attgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcggtta
ttgctcggtttaggcggcagtgccgcatttccccgtccgttgaccgttgaagaactgctg
gtggtaacctttacggaggccgccactgaagagctgcgtgggcgaatccgcagtaatatc
catgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctgtatgcccgcttg
ctggaagaaattagcgataaaaagcaggccgcgcagtggttattactggcggaacgacaa
atggacgaggccgcggtttttaccatccacggtttttgccagcgtatgctcagcctgaac
gctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttgcgt
tatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatcgct
caggtggtgtttgacgtgtggaagggaccgaaggcgctcttaaaggatatcgatcgttat
ctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggcatcg
cgtcatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcggtt
agcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaaattcaaccgcggc
aatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagaccaaaaactat
caattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaagct
ggcggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaaccg
ctatcgattaaagatctggttcttacccgagcgctctcagagatccgtgaaacggtggct
caggaaaaacgacggcgcggcgagctggggtttgacgatatgctcagccgtttagatacc
gcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgtttcccggtg
gcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgtatc
tggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatttat
gcgtttcgtggcgcggatatctttacctacatgaaggcccgcagcgaagtgagcgcgcac
tatacgcttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaagctg
ttcagtcagatgaatgacgcctttatgttccgcgatattcccttcagtccggtaaagttt
gcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatgacc
ctgtggctaatggagggggaaagctgcggttcgggcgattaccaaagttatatggcgcag
gtgtgcgccacgcaaattcgcgactggctgcgcgccggacaaacgggcgacgcgctgctg
acgaacggcgattcgtcgcggcccgttcgcgcctcggatatcagcgtgctggtgcgcagc
aggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtctat
ctttcaaaccgcgacagcgtattcgaaacgctcgaagcgcaggaaatgctgtgggtgttg
caggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctctggcgacatcaatg
atgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggatacg
gttgtcgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgccgatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacggcgggaggc
gaacgtcggctgacggatattctgcatattagcgaactgttacaggaagccggttcgcag
ctggaaagcgaacatgcgctggtgcgttggctggcgcagcatatccttgaacccgatagc
aatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtcacc
attcataaatcgaaaggtctggaatacccgctggtctggctaccttttatcacccatttc
cgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggtgctggacctt
agtcacgccgaagagagcattgcactggcggaggccgaacgcctggcggaagacctgcgc
ctactttatgtcgcgctgactcgtgcagtgtggcattgcagcctcggcgtcgcgccgctg
gtgcggcgtcgcagtgataagaaaggtgagacggatgtgcaccaaagcgcgcttgggcga
ctcctgcaaaaaggcgaaccgatggatgccgcaggctttcgcgcctgtattgaggcgcta
tgcgacgaggatatcgtgtgtcgaacgccaggcaacacggataacgaccgctggcaaatt
gccgctgcatcgcacgcggaactcagcgccagaacgctgcaacgcctgctctatgatagc
tggcgcgtcaccagttattccggtttgcagcagcggggacatagcgtggcgcaagatctt
attcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggcaatg
acgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacagcctgtttgaa
gagcttgattttactcaaccgatagacccccaatgggtacaggaaaaactggagctgagt
ggttttgaaacgcgatgggagcccgtacttacccgctggctggacaccgtgttgcacgtt
ccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtcgaa
atggagttttatctgccgattgcccagccgcttaccgccggagagctggatgcgttgatt
cgtcgatacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgcggc
atgttaaagggctttatcgacctggtgttccgttatgaggggcgctattacctgctcgac
tataaatctaactggctgggcgaggatagcgccgcttatacccagacggcgatggctgcg
gcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcaccgt
taccttcgtcatcgaatgacgaattacgactatgaacgccatttcggcggcgtcatctat
ctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgccct
gcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggaggcg
caatga
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