Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601: SSPA3537
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Entry
SSPA3537 CDS
T00756
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sek
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Pathway
sek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSPA3537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sek03019
]
SSPA3537
03400 DNA repair and recombination proteins [BR:
sek03400
]
SSPA3537
Enzymes [BR:
sek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSPA3537
Messenger RNA biogenesis [BR:
sek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SSPA3537
DNA repair and recombination proteins [BR:
sek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SSPA3537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
CAR61816
UniProt:
A0A6C7I559
LinkDB
All DBs
Position
3936469..3938298
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AA seq
609 aa
AA seq
DB search
MAQAEVLSLESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIP
ALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMAL
TATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDLPKQYDGLNDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLG
LVMQNIAQHSALQLTDAARPVLRGDVPLKLAVPRIVALKPRVMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgagtctggaatcaggggccaaacaggttttgcaggaaacc
tttggctaccaacagtttcgcccgggccaggaagcgattattgatactgcgctctccggt
cgcgactgtctggtcgtcatgcccaccggcggcggcaaatctctgtgctatcaaatcccc
gcgttgttgctggacggattgaccgtcgtcgtttcgcccctgatctcgttgatgaaagac
caggtcgatcagctactggcgaacggggtggcggcggcctgtctgaactccactcaaagc
cgcgagcagcagcttgaggtgatggcggggtgccgtaccggacagattcgtctgctgtat
attgcgccggaacgcctgatgctggacaactttcttgatcatctggcgcactggaatccg
gtattgctggcggtggatgaagcgcactgtatctcgcaatggggacatgatttccgtccg
gaatatgcggctctcggtcagcttcgccagcgttttcccgctttgccgtttatggcattg
accgccaccgccgacgacaccacgcgccaggatattattcgtctgcttgggcttaacgat
ccgttaatccagatcagtagctttgaccgaccgaatatccgctacatgctgatggagaag
tttaagccgctcgaccagctaatgcgctatgttcaggagcaacgcggcaaatcgggtatc
atctactgcaacagtcgggcgaaagtggaagataccgccgcgcgcttgcaaagtcgcggc
attagcgcggcggcctatcatgcggggctggaaaacgctattcgcgccgatgtgcaggaa
aaatttcagcgcgacgatctgcaaatcgtggtggcgaccgtcgcttttggaatgggcata
aacaaacctaacgtacgtttcgtcgtgcatttcgatatcccgcgtaatattgaatcctac
tatcaggaaacgggccgcgccgggcgcgacggactgcctgcggaagccatgctattttac
gatccggctgatatggcctggctacgtcgttgtctggaagagaaaccagccggacagctt
caggatattgaacggcataagctgaatgcgatgggcgcttttgccgaagcgcaaacctgc
cgccgcctggtattgcttaattactttggcgaaggccgacaagaaccgtgcggcaactgc
gatatctgtctcgatctgcccaaacaatatgatggcttaaacgatgcccagattgcgctt
tctaccattggtcgggttaaccagcgttttggcatgggctacgttgtcgaggtgatccgc
ggcgcgaataaccaacgcatccgcgatttcggtcatgacaaactcaaggtttatggcatg
ggacgcgaaaagagccatgagcactgggtgagcgtgattcgccagctcattcatctgggg
ctggtaatgcaaaatattgcgcagcactccgcattacagttgacggatgccgcgcgtccg
gtactccgtggagacgttccgctaaagcttgcggtgccgcgcattgtcgccctcaaaccc
cgcgtgatgcagaaatcgttcggcggtaattacgatcgcaaattgttcgctaagttgcgc
aagctgcgtaaagctatcgctgatgaagagaatatcccgccgtatgtggtctttaacgac
gccacgttgatagaaatggcggaacagatgccggtttccgccagcgagatgttaagcgtt
aacggggttgggatgcgcaaactggagcgcttcgggaaagaattcatggcgctcatccgc
gcgcatgtcgatggtgatgacgaagagtag
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