Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_0282
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Entry
SPUL_0282 CDS
T01740
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sel03009
]
SPUL_0282 (srmB)
Enzymes [BR:
sel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPUL_0282 (srmB)
Ribosome biogenesis [BR:
sel03009
]
Prokaryotic type
rRNA helicases
SPUL_0282 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
DUF561
Motif
Other DBs
NCBI-ProteinID:
AET52726
LinkDB
All DBs
Position
complement(308706..310040)
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK
HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKKRH
RDTKNIGKRRKPSGTKMQEQSSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggatgccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatctgctg
ccggcgttgcagcacctgctcgactttccgcgtaaaaaatcggggccgccgcgcattctg
atcctgacgccaacccgcgaactggcaatgcaggttgccgatcacgctcgtgaactggct
aagcatactcatctggatatcgccacgattaccggcggcgtggcctatatgaaccatgct
gaagtgtttagcgaaaaccaggatatcgtggtcgccacgacgggccgtctgctgcaatat
ataaaagaagagaactttgactgccgggcggttgaaacactgatccttgacgaagctgac
cggatgctcgacatgggcttcgctcaggacattgaacatatcgctggtgagacccgctgg
cgtaaacagacgatgctgttctccgccacgctggaaggcgatgcgattaaagattttgcc
gagcgcctgctggaagacccggttgaggtttccgccaatccgtcaacccgcgagcgtaag
aaaattcaccagtggtactaccgtgccgacaatttcgaacataaagttgcgctgttgaag
cacctgctaaaacaagacgatgcaacccgttctatcgtgtttgtacgtaaacgtgaacgc
gtccatgaactggccgaaacgctgcgtctggcagggatcaacaattgctatcttgaaggt
gagatggcgcagatcaaacgtaacgaaggtattaagcgtctcaccgacggtcgcgttaac
gtgctggtcgcgaccgacgtcgcggcacgtgggattgatattcctgacgtcagccacgtc
attaacttcgacatgccgcgcagtggcgatacctatctgcatcgcattggtcgtacaggc
cgtgctggccgcaaaggcactgcaatctcgctggtagaagcccacgaccatctgttgctg
ctgaaaatcggtcgctacatcgaagagccgctaaaagcgcgcgtcattgatgagcttcgc
ccgaccacgcgtgcgcccagcgaaaagctgaccggcaaaccgtcgaaaaaagtgctggcg
aaacgcgccgagaagaaaaaagagaaagaaaaagagaagccgcgcgtgaagaaacgtcac
cgcgatacaaaaaatatcggtaagcgccgcaagccaagcggtacaaaaatgcaggagcaa
tccagcgaagagtga
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