Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_0770
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Entry
SPUL_0770 CDS
T01740
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPUL_0770 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_0770 (alkA)
Enzymes [BR:
sel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SPUL_0770 (alkA)
DNA repair and recombination proteins [BR:
sel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPUL_0770 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AET53174
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All DBs
Position
826584..827453
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AA seq
289 aa
AA seq
DB search
MFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEHRGLISVSPHLPTHTVQ
VSVSAGLLPVAPACLAKVSRLFDLDCQPAQVAAVLGPLGEDRPGLRLPGSVDTFEQGVRA
ILGQLVSVAMAARLTAKVARRYGEALPDAPDYVCFPGPETLALADPLALKALGMPLRRAE
ALIHLAQATLAGKLALAAPPDIEQSVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYL
IKQRFAGMTPAQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgagctggcagccgccttacgactggtcgtggatgttgggctttcttgcc
gcgcgtgcggtggacggcgtggaaacggtaggcgagggcttttatgcgcgcagcctggtg
gtgggcgagcatcgcggactgatcagtgtgagcccccatctgcccacccacactgtgcag
gtcagcgtgagcgccggattacttcccgtcgcgccggcgtgtctggcgaaggtttcgcgt
ctgtttgatcttgactgccagcccgcgcaggttgccgccgtgctggggccactgggcgag
gacagaccggggctgcgtttaccgggatcggttgatacgtttgaacaaggcgtgcgggcg
atactggggcaactggtgagtgtcgcgatggcggcaaggttgacggcgaaagtggcgcgc
cgctatggcgaggcgttgccggatgcgcccgattatgtctgttttcccggtccggaaacg
ctggcgttggccgatccgctggcgctgaaagctctggggatgccgctgcggcgcgccgaa
gcgctgattcatctggcgcaggcgacgctggcgggaaaactggcgctcgccgcgccgccg
gatattgagcagagcgttaaaaatttacaaacgtttccgggaattggccgctggacggcg
aactatttcgccctgcgcggttggcaggcaaaagatatctttttacccgatgattactta
attaagcagcgcttcgccgggatgacgcccgcgcagatccgtcgctacgcggagcgctgg
aaaccgtggcgttcctacgcgctactgcatatctggtatacccacggctggcaaccgtca
atggatagcgaaatagctggtattcagtaa
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