Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_2025
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Entry
SPUL_2025 CDS
T01740
Symbol
himD
Name
(GenBank) integration host factor beta-subunit (IHF-beta)
KO
K05788
integration host factor subunit beta
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sel03032
]
SPUL_2025 (himD)
03036 Chromosome and associated proteins [BR:
sel03036
]
SPUL_2025 (himD)
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_2025 (himD)
DNA replication proteins [BR:
sel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPUL_2025 (himD)
Chromosome and associated proteins [BR:
sel03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SPUL_2025 (himD)
DNA repair and recombination proteins [BR:
sel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SPUL_2025 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
MDMPI_C
FhbB
Motif
Other DBs
NCBI-ProteinID:
AET54351
LinkDB
All DBs
Position
complement(2024176..2024460)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLATQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaagacttgcaacccagcaatctcacattcccgctaag
gcggttgaagacgcggtaaaagagatgctggagcatatggcctcgactcttgcgcagggc
gagcgtattgaaatccgcggtttcggcagtttttctttgcattaccgcgcgcctcgtacc
ggacgtaaccccaagaccggcgataaagtggaactggaaggaaaatacgttcctcacttt
aaaccgggtaaagaactgcgcgatcgcgccaatatttacggttaa
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integrated database retrieval system
