Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_2314
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Entry
SPUL_2314 CDS
T01740
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel03030
DNA replication
sel03430
Mismatch repair
sel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPUL_2314 (holA)
03430 Mismatch repair
SPUL_2314 (holA)
03440 Homologous recombination
SPUL_2314 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sel03032
]
SPUL_2314 (holA)
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_2314 (holA)
Enzymes [BR:
sel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPUL_2314 (holA)
DNA replication proteins [BR:
sel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPUL_2314 (holA)
DNA repair and recombination proteins [BR:
sel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPUL_2314 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AET54626
LinkDB
All DBs
Position
2324022..2325044
Genome browser
AA seq
340 aa
AA seq
DB search
MYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTDWGS
LFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKAQEN
AAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNLQLDDAANQLLCYCYEGNLLALAQ
ALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEGSEP
VILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGNALLRLHPAQLRQAVQ
LLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgtatcccgaacaactccgcgcgcagctcaacgaagggctgcgcgcggcatatctgcta
ttgggcaacgatccgctgctgctgcaggaaagtcaggacgctattcgtctggcggctgcg
tcgcaaggcttcgaagagcaccacgcttttactctcgatcccagtaccgactggggatcg
cttttctcactctgccaggcgatgagcctgttcgccagccgtcaaacgctggtgctgcaa
ctgccggaaaacgggcctaacgcggcaatgaatgagcaactcgccaccctgagcgagctg
ctgcatgacgacctgttattaatagtacgcggaaacaagctcaccaaagcgcaggaaaac
gccgcctggtataccgcgctggcagaccgtagcgttcaggtcagttgtcagacgccggag
caggcgcagcttccccgctgggtggccgccagagcgaaagcacagaatttgcaactggat
gacgccgcgaaccaactgctgtgctattgctatgagggcaatctgttggcgctggcgcag
gcgctggaacggctgtcgctgctttggcctgacggtaagttaacgcttcctcgcgtggag
caggccgtcaatgacgccgcccactttacccctttccactgggtggatgcgttactgatg
gggaaaagcaaacgcgcgctgcatatcctgcaacagctacgccttgaaggcagcgaaccg
gttattctgctgcgcaccctccagcgagagctgctgctactggtaaatctcaaacgtcag
tccgcgcatacgccgttacgcgcgctgtttgataaacaccgggtctggcaaaaccgtcgc
cccatgatcggcaacgcgttgctgcgtctccatcctgcacagcttcgccaggccgtgcag
ttactgacgcgtacagaaattacgctcaaacaggattatggtcagtcggtatgggcagac
cttgaagggctgtcgctcctgctctgccataaggcgctggcagacgtatttattgatggg
tga
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