Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_2413
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Entry
SPUL_2413 CDS
T01740
Symbol
fimD
Name
(GenBank) outer membrane usher protein FimD precursor
KO
K07354
outer membrane usher protein
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sel02035
]
SPUL_2413 (fimD)
Bacterial motility proteins [BR:
sel02035
]
Pilus system
Fimbrial proteins
SPUL_2413 (fimD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AET54724
LinkDB
All DBs
Position
complement(2416257..2418869)
Genome browser
AA seq
870 aa
AA seq
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MKKTTWFAGRFPGYVSPLSGVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEK
GNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGAGDKSGGLMPCFTPEWIKRLGVNTAVF
PVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPA
ALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWSYSKGDGYHSQRWNNIGTWVQ
RAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKL
TIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQRE
GRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNL
GDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDD
VAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQ
NYWNTADTNTWYQLGYASGWQGISYSLSWSWNESVGISGADRILAFNMSVPFSVLTGRRY
ARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSSNGYSGSARAS
WQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIE
NQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDT
RIGVRAIITARLGGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKN
ARCIAPYALAEDSLKQAITIASATCIRPSS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacaacctggtttgcagggcgatttcccggctatgtatcaccgttaagcggc
gtggcgctgtcggtgctggcggcgctgtgtccgctgacgagccgcggcgaaagttatttc
aaccctgcgtttttgtcggcggataccgcgtccgtggcggatttatctcgctttgaaaaa
ggtaatcatcagccgcctggtatttaccgggtggatatctggcgtaacgacgaattcgta
gcgacgcaggatattcgttttgaggcgggcgccgtgggcgccggcgataaatccggcggc
ctgatgccttgttttacaccggagtggattaaacggctgggcgtgaataccgcggtgttc
cctgtctcagataaaggcgtcgataccacgtgtattcaccttcctgagaaaatcccgggc
gcggaggtcgcgttcgatttcgcgtcgatgcgcttaaacattagcttgccgcaggcgtca
ttgctcaacagcgcgcgtggctatatcccgccggaagagtgggatgaagggatacccgcc
gcactcattaattacagttttaccggtagccgcggaacagacagcgatagctattttttg
agtctgctgagcgggttgaactatggcccctggcggctgcgtaataacggagcctggagc
tattcgaaaggggacggctatcattcgcaacgctggaacaacattggcacctgggtacag
cgcgccatcattccgctaaaaagcgaactggtcatgggggacagcaataccgggaacgat
gttttcgacagcgtcggctttcgcggagcgcggctgtactcttctgacaatatgtatccc
gatagcctgcagggctacgcccccacggtcagagggatcgcccggacggcggcaaagctg
acgatacgacagaacgggtatgttatctaccaaagctatgtgtcgccgggcgcgtttgcg
attaccgatcttaatcctacctcttccagcggcgaccttgaggtgacggtagatgaaaaa
gacggtagccaacaacgttacacggtgccttactctaccgttccgctattgcagcgtgag
ggtagggtgaagtatgacctggtggccggggattttcgcagcggcaatagtcagcagtct
tcgccattctttttccagggaacggtgattgccggcctgcctgcggggctgacggcttac
ggcggtacgcaacttgccgatcgttaccgtgccgtggtggtcggggcggggcgaaatttg
ggcgactggggagccgtgtcggtcgatgtcacacatgcgcgtagccaactggcagatgac
agcacccatcaggggcaatcgttgcgttttctgtacgccaaatcgctgaataattacggg
actaattttcaattgctgggttaccgctattccacgcgcggattttacaccctggatgat
gtggcataccgcagtatggaagggtacgactacgaatacgatagcgacggacgccgccat
aaagtgccggtggcgcagagctaccacaatctccgctacagcaaaaaaggccgctttcag
gtcaatatttcgcaaaacctgggggattacgggtcactgtatctttccggcagtcaacaa
aattactggaatacggcggataccaatacctggtatcaactgggatacgccagtggatgg
caaggcataagttattcgctgtcatggtcgtggaacgagtcggtggggatctcaggcgcc
gatcgcattctggcattcaatatgtccgttccgtttagcgttctgaccggacggcgctat
gcgcgcgacactattcttgatcgtacttatgccacgtttaacgccaaccgcaaccgcgac
ggcgacaatagctggcagaccggcgtgggcggcacgcttctggaaggacgtaatctgagc
tacagcgtgacgcaagggcgtagcagtagcaatggttatagcggcagcgccagagctagc
tggcaggcgacgtatggcacgctgggcgtgggatataactacgatcgcgatcagcatgac
tataactggcaactttccggcggcgtggtcggtcatgcggatggtattacgtttagccaa
ccgttgggcgataccaatgtcttgattaaagcgccgggagcgaaaggcgtgcgcatcgaa
aaccagaccggcgtgaaaacggactggcggggttatgcggtaatgccctacgccacggta
tatcgctataaccgcgtcgcgttagataccaacacgatggacaaccataccgatgtcgaa
aataacgtcagcagcgtagtgccgacagagggcgctctggtacgggccgcttttgatacg
cggataggcgtaagggcaatcattaccgcgaggcttggcggacgtccgttaccgtttggc
gcgatagtacgagaaaccgccagcggtattaccagtatggtcggcgatgacgggcaaatt
tatctgagcggcttgccgctaaaaggtgaactgttcatccagtggggagaggggaaaaac
gcgcgttgtatcgccccttacgccctggcggaggatagcctgaagcaggcgattacgata
gccagcgcgacctgtatccgtccgtcgtcataa
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