Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_3004
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Entry
SPUL_3004 CDS
T01740
Symbol
recC
Name
(GenBank) exonuclease V subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPUL_3004 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_3004 (recC)
Enzymes [BR:
sel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SPUL_3004 (recC)
DNA repair and recombination proteins [BR:
sel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPUL_3004 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AET55279
LinkDB
All DBs
Position
complement(3018048..3021419)
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AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI
AFPLPASFIWEMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDKDEFVLLLHYLTDDTD
KRKLFQLSARAADLFDQYLVYRPDWLTQWEAGKTVEGLGEAQNWQAPLWKALVEYTAALG
QPRWHRANLYQRFIQTLESATACPPGLPSRVFICGISALPPVYLRALQALGKHIEIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEDRHLPLFRENQNPEALFNSDGEQDIGNPLL
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHRIQADILELESHAVAGVNLEEYSR
SDNKRLLDPEDNSLSFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPTERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVSVLA
ARFTINEEGLRYLRLWVNESGIRWGIDDDNVRELELPATGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIIAEGVAAEYGDAVPISLLRDELAQRLDQERISQRFLAGPIN
ICTLMPMRSIPFRVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDETLTCDESEARVKAHI
TRLHTRMPFDAQNYQPGEQQSYAREWLPAASQSGKAHSDFVQPLPFTMPETLTLESLQRF
WAHPVRAFFQMRLQVNFRSEESEIPDAEPFELEGLTRYQLNQQLLNTLVEEDDAERLFRR
FRAAGELPYGAFGEIFWDAQCQEMQQLASRVIACRKPSQSLEVDLLCNGVQLTGWLPQVQ
EDGLLRWRPALISVAQGVQLWLEHLVYCASGGSGESRLFLRKEGEWRFPPLDKTQAMAYL
AQLIEGYREGMSSPLLVLPESGGAWIKACYDAENDVMLDDDDTLQKARTKFLQAYEGNMM
VSGEGEDIWYQRLWRQLESETLQAIIAQSRHYLLPLFRFNQSR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttgatggaattcatc
gtcgaacgcgagcggctggatgatccctttgaaccagaaatgattctggtacaaagcacg
ggtatggcgcagtggctgcagatgaccctttcacaaaagtttggtattgcggcgaatatc
gcttttccgttaccggcgagttttatctgggagatgtttgtccgcgtgttgccggatatc
cccaaagaaagcgctttcagcaaacaaagcatgagctggaaactgatgaccttgctgccg
cagttgctggataaggatgagtttgtactgctgctccattatctgaccgacgacaccgat
aaacgcaaactctttcagctttccgcgcgcgccgccgacctgttcgatcagtatctggtt
tatcggcctgactggcttacgcagtgggaagcgggaaaaaccgtggaaggtctgggagag
gcgcaaaactggcaggcgccgttgtggaaagcattggtggaatataccgccgcgctgggg
cagccgcgctggcatcgcgccaatctctaccaacgctttattcaaacgctggaaagcgcg
accgcctgcccgccagggttgccgtcccgcgtttttatttgcggcatttccgcgttaccg
ccagtgtatctcagagcattgcaggcgctgggtaaacatattgaaatccatctccttttt
actaatccgtgtcggtattactggggggatattaaagacccagcctggctggcaaaactc
atggctcgccagcgtcgtcacagttttgaagaccgtcatttaccgttgttccgtgaaaac
cagaatccggaagccttatttaacagcgacggtgaacaggatatcggtaatccgctactg
gcctcatggggaaaactgggacgggattatatctacctgctatctgaactggaaaacagc
caggagctggatgcgtttgttgatattacgccagataatcttttgcatcggattcaggcg
gacatccttgaactggaaagccatgcggtggcgggcgtaaatcttgaggagtattcgcgc
agcgacaataagcgtctgctcgatcccgaggataacagcctctcttttcacgtttgtcac
agcccgcagcgcgaggtggagatactgcacgatcgcctgctggcgatgctggaagccgat
ccgacactaacgccgcgcgacattatcgttatggtggctgatattgacagctatagcccg
tttatccaggcggtgtttggtagcgcgccaacggagcgctatctgccttatgccatttcc
gatcggcgggcgcgtcagtcacatccggtgttacaggcatttatcagcctactttcgtta
ccggacagccgctttgtctccgaggatgttctggcgttgttagacgtatcggtattggct
gcccgctttacgatcaacgaagaagggttgcgttatttgcgcttgtgggtcaatgagtca
ggcattcgctggggaattgacgatgacaacgtacgcgagctggaacttcctgccacgggg
cagcatacgtggcaatttggcctgacgcgtatgctgctggggtatgcgatggaaagcgcc
cagggcgagtggcagtcggttctgccttatgacgaatccagcggtctgattgctgagctg
gtcgggcatctggcttcgctgctgatgcagcttaatatctggcggcgcggtctggcgcag
gagcgaccgctggaagagtggctgcccgtttgtcgcgatatgctcaatgatttcttcctg
cccgatgcggacacggaagcggcaatgacattgattgaacagcagtggcaggccattatc
gccgaaggcgtcgcggcggaatatggcgacgcggtaccgatttcgctactgcgggatgaa
ctggcgcagcgtctggatcaggaacgtattagccagcgcttcctggcgggccccatcaat
atttgtacgctgatgccgatgcgttccattccgtttagagtcgtttgcctgctgggaatg
aacgacggcgtatacccgcgccagcttgcgccgttgggctttgacctgatgagccaaaaa
cccatgcgcggggatcgtagccgtcgcgacgatgaccgctacctgtttctggaagcgtta
atctcggcgcagcagacgctgtatatcagctacatcggtcgctccatccaggataatagc
gaacgctttccctctgtactggtgcaagaattggtggattacatcggacaaagccactat
ttgccgggcgacgaaacgctgacctgtgatgagagcgaagcacgagtcaaagcgcatatt
acgcgtctgcatacccgtatgccttttgatgcgcaaaattaccaacccggcgaacagcaa
agttatgccagagagtggttgcccgcggcgagtcagtcgggaaaagcgcattctgacttt
gtgcagccgcttccttttacgatgccggaaacattgactctggaaagtctgcagcgtttt
tgggcccatccggtacgcgcattttttcagatgcggcttcaggttaatttccgctcggaa
gagagtgagattcctgatgcggaaccgtttgaattagagggattgacgcgatatcaactt
aaccaacagttgctcaatacgctggttgaagaggacgacgccgaacgcttgttccgccgt
ttccgggctgcgggagagttgccttacggcgcgtttggcgaaatattctgggatgcgcaa
tgtcaggagatgcagcaactggcaagccgggtcatcgcctgccgtaagccgagccaaagc
ctggaagtggatctgctttgcaatggcgttcagctaaccggctggctgccgcaggtacag
gaggatggattattgcgctggcgtcccgctttaatcagcgtggcgcaaggtgtgcaactt
tggctggaacaccttgtctattgtgccagcggcgggagtggcgaaagtcgcctgtttttg
cgcaaagagggagagtggcgatttccgcctcttgataaaacgcaggcaatggcttacctg
gcgcaactgattgaaggctaccgggaaggcatgtcttctccgctattggtactgccggaa
agcggcggcgcatggataaaagcctgttatgacgctgaaaatgatgtcatgttagacgac
gatgacaccttacagaaggccagaacaaagtttctacaggcttatgaaggcaacatgatg
gtgagcggcgaaggcgaagatatctggtatcaacgtctttggcgtcagctggaatctgaa
acgttgcaggctatcattgcgcagtcacggcattacctgttaccgctgtttcgttttaat
cagtctcgttga
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integrated database retrieval system
