Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_3041
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Entry
SPUL_3041 CDS
T01740
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel03410
Base excision repair
sel03430
Mismatch repair
sel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPUL_3041 (recJ)
03430 Mismatch repair
SPUL_3041 (recJ)
03440 Homologous recombination
SPUL_3041 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_3041 (recJ)
DNA repair and recombination proteins [BR:
sel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SPUL_3041 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPUL_3041 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPUL_3041 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AET55314
LinkDB
All DBs
Position
complement(3053565..3055298)
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AA seq
577 aa
AA seq
DB search
MKQQRQLRRREADETAELPADLPPLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNA
VEILYNAFREGIRIIVVGDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPE
VVDQAKARGAQLIVTVDNGISSHAGVAHAKTLGIPVIVTDHHLPSDTLPEAEAIINPNLR
DCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARVLASELDALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
DLMIKFGGHAMAAGLSLEEHKFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSME
VAQLLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTT
CWPDNGVREVELAYKLDINEFRGNRSLQIIIDDIWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagagacaacttcgtcggcgcgaggctgatgagacggcggaactccccgcc
gatcttcctccattactacgacgtttatatgccagccggggcgttcgtagcgcccgcgaa
ctggagcgcagcgtgaaaggaatgctgccctggcaacagcttagcggcatagataacgcg
gtggagatcctctacaacgcctttcgcgaaggtatccgcattattgttgttggcgatttt
gacgccgacggcgcgaccagtactgcgctaagcgtattgggaatgcgtgcgttgggatgt
gacaacatcagttatctggtgcctaatcgctttgaggacggctacggtttaagccctgaa
gtggtcgatcaggcgaaggcgcgcggcgcgcagcttatcgtcaccgtagataacggcatc
tcatcccacgccggcgtagcgcatgcaaagacgttggggattccggtgatcgtgaccgat
caccacctgcctagcgatacattgccggaggccgaagcgattattaatcccaatctgcgc
gactgcgaattcccgtctaagtcgctggcgggcgtcggcgtggcgttttacctgatgctg
gcgttgcgaacatttttgcgcgacaaaggatggttcgacgagcgcaacattgcgccgccg
aatttggcggagctgctggatttagtggcgttgggaacggtagcagacgttgtgccgctg
gacgctaacaaccgtattctgacctggcaagggctaagtcgtattcgtgccgggaaatgc
cgtccgggaattaaagcgttgctggagatatcgaatcgcgatccgcagcagcttgccgcc
agtgatttaggcttcgcgttggggcctcgcctgaatgccgccggcaggctggatgatatg
tccgttggcgtggcgttactgttgtgcgacaacctcggcgaagcgcgtgttctggccagc
gagctggatgcgcttaaccagacgcgcaaagaaatagagcaggggatgcaggcggaagcg
cttatcctgtgcgaaaagcttgagcgcagtagtgaaacgcttccgggcggtctggcgatg
tatcatcctgaatggcaccagggcgtggtcggaattctggcgtcgcgcattaaagagcgt
tttcaccgcccggtgatcgcctttgcgcctgcgggcgacggcacgctaaaaggctcaggc
cgatcgattcaggggctgcatatgcgcgatgcgctggaacggctggataccctttaccct
gatctgatgatcaagttcggcggccatgcgatggcggcgggattgtcgctggaagagcat
aaattcgagcagtttcagcaacggtttggcgagctggtgacggaatggctcgatcctgcc
ctgttgcaaggcgaggtgatctccgatggtccattaagcgcggcggagatgtctatggaa
gtggcgcaactgttgcgggatgccggaccgtgggggcaaatgttcccggaaccgttattc
gatggtcgtttccgtctgctacagcagcgtctggtgggcgagcgtcacctcaaggtgatg
gtggagcctgtcggcggcggcccgctgttggatggcatcgcatttaatattgatacgacc
tgttggccggataacggcgtgcgggaggtagaactggcttataaactggacattaacgag
tttcgcggcaaccgtagtttacagattattatcgatgatatttggccgctatga
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