Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_3380
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Entry
SPUL_3380 CDS
T01740
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sel03019
]
SPUL_3380 (cafA)
03009 Ribosome biogenesis [BR:
sel03009
]
SPUL_3380 (cafA)
Messenger RNA biogenesis [BR:
sel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPUL_3380 (cafA)
Ribosome biogenesis [BR:
sel03009
]
Prokaryotic type
rRNA processing factors
SPUL_3380 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AET55640
LinkDB
All DBs
Position
complement(3384212..3385681)
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AA seq
489 aa
AA seq
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MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVCEE
DLASDAAYLKRVWTKVMERKKRPQTRYQMYGELALAQRVLRDFADAQLDRIRVDSRLTYE
SLLEFTAEYIPEMTSKLEHYSGHQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLEQALSKDRVKTSINGFSPLGLVEMTRKRTRESVEHVLCNECPTCHGRGTVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHALAEVEIFVGKQVKVQVEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaattgttggtaaacgtaacgccatcggaaacgcgcgtggcgtacattgat
ggcggtattcttcaggaaatccatattgagcgcgaagcgcgacgcggaatcgtaggcaat
atctacaaaggtcgtgtaagtcgtgtacttccaggtatgcaggcggcttttgtagatatt
gggctggataaagccgcatttcttcacgcttccgacattatgccgcataccgaatgcgtg
gcgggcgacgagcaaaaacagtttaccgtgcgcgatatctccgaactggtgcgtcaggga
caggatctgatggtgcaggtagtgaaagatccgctcggcacgaaaggcgcgcgtttgacc
acggacatcacgttgccctcccgttaccttgtttttatgcccggcgcgtcacacgttggc
gtttcccagcgtatcgaaagcgaaagtgaacgcgagcgcctgaaaaaggtggtggcggaa
tactgcgacgaacagggcgggtttattatccgcaccgcggcggaaggcgtgtgtgaagag
gatctcgcgtctgacgccgcctatctcaagcgcgtctggacgaaagtcatggagcgcaaa
aagcgtccgcaaacgcgctaccagatgtatggcgaactggcgctggcgcagcgcgtgctg
cgcgatttcgccgatgcgcagttggaccgaattcgcgtcgactcacgtctgacctatgag
tcgctgctggagtttaccgcagaatacatcccggaaatgaccagtaagctggagcattac
agtggccatcagccgatcttcgatctttatgacgtggaaaatgagatccagcgcgcgctg
gagcgtaaggttgaactcaagtctggcggttatctgattatcgaccaaaccgaagcgatg
acgacggtagatatcaataccggcgcgtttgtcggacaccgtaatctcgacgacaccatt
tttaataccaatattgaagcgactcaggccattgcccgccagctacgcctgcgtaatctg
ggcggcattatcattatcgattttatcgacatgaataatgaagatcatcgccgccgggtg
ctgcattcgctggaacaggcgttaagtaaggatcgcgtgaaaaccagtattaacggtttt
tcgccgctggggctggtggaaatgacccgtaaacggacccgtgaaagcgtggaacatgtg
ctttgtaacgagtgtccaacctgtcatggccgcgggacggtaaaaacggtggaaaccgtc
tgttatgagatcatgcgtgaaattgtacgtgttcatcacgcttatgactccgatcgcttc
ctggtttatgcttctcctgcggtggcggaagcgctgaaaggcgaagaatcacacgcgctg
gcggaagtcgaaatctttgtcggcaaacaggttaaagttcaggtcgaaccgctttataac
caggagcagtttgacgtcgtaatgatgtaa
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