Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_3845
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Entry
SPUL_3845 CDS
T01740
Symbol
rfaB
Name
(GenBank) lipopolysaccharide 1,6-galactosyltransferase
KO
K02840
UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel00540
Lipopolysaccharide biosynthesis
sel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SPUL_3845 (rfaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sel01005
]
SPUL_3845 (rfaB)
Lipopolysaccharide biosynthesis proteins [BR:
sel01005
]
Core region
SPUL_3845 (rfaB)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
MGDG_synth
DUF4751
Motif
Other DBs
NCBI-ProteinID:
AET56083
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Position
3882866..3883945
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AA seq
359 aa
AA seq
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MKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKEIKYAQS
FSNIKLSFLRRAKHVYNFSQWLKETSPDIVICIDIISCLYTNKARKKSGKQFTIFSWPHF
SLDHKKHAECITYADYHLAISSGIKEQMMARGISAQNISVVYNPVSIKTIIVPPPERDKP
AVFLYVGRLKFEGQKRVKDLFDGLTRTTGEWQLHIIGDGSDFEKCQAYSRELGIEQRVIW
YGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDMIKPG
LNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSKLQK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcatttattggcgaagcggtatctggttttggagggatggaaaccgttatt
agcaacgttatccatacgtttgaaaatagctctccgaaaatcaactgtgaaatgtttttc
ttttgtcgtaatgacaaaatggataaagcatggctaaaagagattaaatatgcgcaatca
ttctcaaatataaaattaagttttcttcgtcgagctaagcatgtttataattttagtcag
tggctgaaagaaacgtcaccggatattgtgatatgtattgatatcatctcatgtctttat
accaataaagcacgaaagaaaagtggtaaacagtttactattttctcgtggccgcatttt
tcgctcgaccataaaaaacatgcagaatgtataacgtacgcggattatcatctggccata
agtagtggtattaaagaacagatgatggcacggggtatctcagcgcaaaatattagcgtc
gtttataatcctgtctctattaaaacaatcattgtgccgccgcctgagcgcgataaaccc
gctgtatttctctatgtagggcgtcttaaatttgaaggacagaaaagagttaaagattta
tttgatggcttaactcgtacgacaggggaatggcagctacatattattggtgatggctca
gattttgaaaagtgccaggcctatagtcgggagcttggtattgagcagcgtgtgatctgg
tatggttggcaaagcgcgccgtggcaagtcgtacagcaaaaaataaaaaatgtcaccgcg
ttactacttacctctgcgtttgagggatttcctatgaccctgctggaagcaatgtcatat
ggaattccgtgtattagttctgattgtatgtctggcccgcgcgatatgattaaacccggt
ttgaatggtgagctttacactccgggtgctatagatgattttgtaggacaccttaatcgc
gttatttctggtgaagtaaaatatcagcatgatattattcccggcacgattgagagattt
tacgatgtgctatattttaaaaattttaataatgcaatattctcgaaattacaaaagtga
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