Selenomonas sp. oral taxon 478: ADJ74_03140
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Entry
ADJ74_03140 CDS
T04017
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sele
Selenomonas sp. oral taxon 478
Pathway
sele03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sele00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ADJ74_03140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sele03021
]
ADJ74_03140
03400 DNA repair and recombination proteins [BR:
sele03400
]
ADJ74_03140
Enzymes [BR:
sele01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ADJ74_03140
Transcription machinery [BR:
sele03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ADJ74_03140
DNA repair and recombination proteins [BR:
sele03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ADJ74_03140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AKT53527
UniProt:
A0A0K1FGD9
LinkDB
All DBs
Position
1:complement(651989..656020)
Genome browser
AA seq
1343 aa
AA seq
DB search
MLDVNNFDSMRIGLASPDKIRAWSHGEVKKPETINYRTLKPERDGLFCERIFGPTRDWEC
HCGKYKRIRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDV
SPRSLEKVLYFAYYIVLDAGETDLKKKELLSEREYHDALEKYGNTFRVGMGAEAIKELLE
ELDLEQMSAQLKNDVRTTSGQKKVRAIRRLEVVEAFRKSGNQPSWMIMDVVPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKE
MALELFKPFVMKKLQADGAAHNIKSAKRMVERARPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLTEGRALKLHPLACTAYNADFDGDQMAIHLPLSAEAQTEARVLMLAANHIL
APKDGKPIIVPSQDMVLGSYYLTKLRPGAKGEGKVFTGIAEALLAYQEKVLDLQAEIRVQ
IAGYGLVRSSLGRLIFNEILPEELRHYAQDAETGEWRLGVLMNKKELGKLVANCYDHFGA
TKTAEVIDNVKNLGYHYACIAGMTVAVSDVIVPPKKKEIIADTQAKVNKVERQFSRGLIT
EDERYKKVVQLWTQATDDVADAMMDNMDPFNPIFMMADSGARGNKQQMRQLAGMRGLMAD
PSGKIIDLPITANFREGLSVSDYFISSHGARKGLADTALRTADSGYLTRRLVDVAQDVIV
REEDCDVSAINLLQVRARMAESAFDALELLVDSLMGRLLAAAIYDPETKEILYPQDTTLD
DEVLETIGERDIREIMVRGSSVNAEGAVSNAMVTESITLGEPDARKRKKAHAAIVRELSG
KEVVREAVLDDGTVLAEEGVILTDKMVEAILSSELHEIHIRNNNVRGIEVEAIMEGAGVI
ESLADRIVGRVLAEDIVDEATGETIAHINDSVDEALAKRIEGVRKRVSIRSVLTCKSQFG
VCMKCYGRDLANQAEVEIGEAVGIIAAQSIGEPGTQLTMRTFHSGGVAGDDITQGLPRVE
ELFEARKPKHNAIIAENEGVVAIDDTGKGMRTVTITPEGGVPREYSVPFGARMAARDGMV
MKPGDKITEGSVNPHDILRVCGLQATQRYLVYEVQKVYKSQGVEINDKHIEVMVRQMLHK
VKIEEAGTTDFLPGEYIEINAFEAANTKAIEEDGEPAVAKPILLGITKASLATDSFLSAA
SFQETTRVLTDAAIKGKIDPLVGLKENVIIGKLIPAGTGMTRYRHLEIVDHAPQPVPEPP
EPEASAEEPVEEVDLSRLEKLSS
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
ttgctggatgtaaacaattttgactcgatgcggattggactcgcttctcccgataaaatt
cgtgcatggtcgcacggcgaggtgaaaaagccggagaccatcaactaccgcaccttgaag
cccgagcgtgacggcctcttctgcgagcgcatctttggaccgacgcgcgactgggagtgc
cactgcggaaagtacaagcgcatccgctacaagggcgtcgtctgcgatcgctgcggcgtc
gaggtgacgcgcgcaaaggtgcgccgcgagcgcatgggacacatcgagctcgccgcaccc
gtctcccatatctggtacttcaagggcattccgagccgcatgggactcatcctcgatgtc
tccccgcgctcgcttgagaaggtgctctacttcgcctactacatcgtcctcgatgcgggc
gaaaccgatctcaagaaaaaggaactgctctccgagcgcgagtatcacgatgcactcgaa
aagtacggcaatacctttcgcgtcggcatgggcgcggaggcgatcaaggagctccttgag
gagctggatcttgagcagatgagtgcacagctgaaaaacgacgtgcggacgacctccgga
cagaagaaggtgcgtgccatccgccgccttgaggtggtcgaggcattccgcaagtccggc
aatcagccttcgtggatgatcatggacgtcgtgcccgtcattccgcctgacctgcgcccc
atggtgcagctcgacggcggacgcttcgcgacctctgatctcaacgacctctaccgccgc
gtcatcaaccgcaacaaccgcctgcgccgtctgctcgacctcggtgcgcccgacatcatc
gtgcgcaacgagaagcgcatgctgcaggaggccgtggacgcgctcatcgacaacggccgc
cgcggccgccccgtcacaggccccggcaaccgtgcgctgaagtcgctctcggatatgctc
aagggcaagcaagggcgcttccgtcagaacctcctcggcaagcgtgtcgactactcggga
cgctccgttatcgtcgtcggcccggagctgaagctccatcagtgcggcctgccgaaggag
atggcgctcgagctcttcaagccctttgtcatgaaaaaactgcaggcggacggcgctgcc
cacaacatcaagtcggcaaagcgcatggtcgagcgcgcacgccccgaggtctgggacgtg
ctcgaggatgtcatcaaggagcatcccgtgctcctcaaccgtgcaccgacactgcaccgt
ctgggtatccaggcctttgagccggtgctcaccgaggggcgtgccctgaagctgcatccg
ctcgcgtgtacggcgtacaacgcggactttgacggcgaccagatggccatccatctgccg
ctctcggcggaggcgcagacggaggcacgcgtcctcatgctcgccgcaaaccacatcctc
gcgccgaaggacggcaagcccatcatcgtcccctcgcaggacatggtgctcggctcgtac
tatctcacgaagctgagacccggagcgaagggcgagggcaaggtgttcaccggcatcgcc
gaggcactcctcgcgtatcaggaaaaggtgctcgacctgcaggcggagatccgcgtgcag
atcgcgggctacggcctcgtccgcagctcgctcggccgcctcatcttcaacgagatcctg
cccgaggagctgcgccactacgcgcaggatgcggagaccggcgagtggcgcctcggcgtc
ctcatgaacaagaaggagctcggcaaactcgtcgcgaactgctacgatcatttcggcgcg
accaagaccgctgaggtcatcgataacgtgaagaacctcggctaccactacgcctgcatt
gcaggcatgacggtcgccgtctccgacgtcatcgtgccgccgaagaaaaaggaaatcatc
gcggacacgcaggcgaaggtcaacaaggttgagcgtcagttctcgcgtggtctcatcacc
gaggacgagcgctacaagaaggtcgtccagctctggacacaggcgacggacgacgtcgcg
gacgccatgatggacaacatggatccctttaaccccatctttatgatggcggactcgggc
gcccgaggcaacaagcagcagatgcgtcagctcgcgggtatgcgcggactgatggctgac
ccatcgggtaagatcatcgacctgccgatcacggcgaacttccgtgagggactatccgtt
tccgactacttcatctcctcgcatggtgcgcgcaagggtcttgccgatacggcactccgt
acagcggactcgggctacctcacgcgccgtctcgtcgacgtggcacaggatgtcatcgtc
cgcgaggaggactgtgacgtctctgcgatcaacctcctgcaggtgcgtgcgcgcatggca
gagtctgcgtttgacgcactcgaactcctcgtcgacagcctcatgggacgcctccttgcg
gcggcgatctacgaccccgagacgaaggagatcctctacccacaggatacgacgctcgac
gacgaggtcctcgagaccatcggcgaacgcgacatccgcgagatcatggtgcgcggttcc
tccgtcaacgcggagggggcggtcagcaacgccatggttacggagagcatcacactcggc
gagccggatgcgagaaagcgcaagaaggcacacgctgccatcgtgcgcgagctcagcgga
aaggaagtcgtgcgtgaggctgtcctcgacgacggcaccgttctcgcagaggagggcgtg
atcctcactgacaaaatggtcgaggcgatcctctcctccgagctccacgagatccacatc
cgcaacaacaatgtgcgcggcatcgaagtcgaggccatcatggagggcgcgggcgtcatc
gagtcgctcgccgaccgcatcgtcggccgcgtgctcgccgaggacatcgtggatgaggcg
acgggtgaaaccattgcccacatcaacgactccgtcgatgaggcacttgccaaacgtatc
gagggcgtccgaaaacgcgtttccatccgcagcgtcctcacatgcaagtcgcagttcggc
gtctgcatgaagtgctacggccgcgacctcgccaaccaggcggaggtcgagatcggcgag
gcggtcggcatcattgccgcacagtccatcggcgagccgggcacacagctcaccatgcgt
accttccactcgggcggtgtcgcaggtgacgacatcacacagggtcttccgcgcgtcgag
gagctcttcgaggcacgcaagcccaagcacaacgccatcatcgcagagaacgaaggtgtc
gtcgccatcgacgatacgggcaaggggatgcgcacagtcacgatcacgcccgagggcggc
gtgccgcgcgagtactctgtgccgttcggtgcgcgcatggccgcgcgtgacggcatggtc
atgaagcccggtgataagattaccgagggctccgtgaacccgcacgacatcctgcgcgtc
tgcggcctgcaggcgacccagcgctacctcgtctacgaggtacagaaggtctacaaatcg
cagggcgttgagatcaacgacaagcacatcgaggtcatggtacggcagatgctgcacaag
gtcaagatcgaggaggccggaacgaccgacttcctcccgggcgagtacatcgagatcaac
gcattcgaggcggcgaacaccaaggcgatcgaggaggacggcgagcccgctgtggcaaag
cccatcctgctcggcatcacgaaggcatcgctcgccacggattccttcctctcggcggcg
tccttccaggagaccacgcgcgtcctcaccgacgccgcgatcaaggggaagatcgacccg
ctcgtcggcctcaaggaaaacgtcatcatcggcaaactcatcccggccggtacgggcatg
acccgttaccgccacctcgagatcgtcgaccacgcaccgcagccggtgcctgagccgcct
gagcccgaggcgtctgccgaggagcccgtcgaagaagtcgacctctcacggctggagaag
ctgagcagctga
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