Selenomonas sp. oral taxon 478: ADJ74_09005
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Entry
ADJ74_09005 CDS
T04017
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sele
Selenomonas sp. oral taxon 478
Brite
KEGG Orthology (KO) [BR:
sele00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sele03400
]
ADJ74_09005
DNA repair and recombination proteins [BR:
sele03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ADJ74_09005
Archaeal homologous recombinant proteins
ADJ74_09005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
FtsK_SpoIIIE
nSTAND_NTPase5
AAA_16
ABC_tran
Adenyl_cycl_N
nSTAND6
AAA_22
AAA_15
NPHP3_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AKT54570
LinkDB
All DBs
Position
1:1940568..1943648
Genome browser
AA seq
1026 aa
AA seq
DB search
MRPLKLRIQAFGSYVDEQILDFETALADAPFLLIHGATGSGKTTILDAIVFALYGESSGD
IREGAMLRSSTAPPDRATEVEYVFALGRRRYRVLRSPAYSRMSRGKMTRRAATGQLFRLP
DVGETGEEKLLAANITDVSERISQLIGFDADQFRQVVLLPQGQFQRFLLAEVKDRSAIMQ
RIFRTERYQRIEEALTKEAQQLERTAQAERERAEGILRAEGMASSDELRTRLSELSEEIR
RQDEILREHEKVQKSARRAREEGAAAQQKLSARDAAQSDLEKKREQAESVRDFRVRLSRA
QRAQPVLYKERSYIEALNTERTRREAYASAAEDCAAAKTEHDASIECLKQVEAHTDEHTK
NVEQLRRMRDYEPLASRYQECTSALRDLRVRAVEGEEKYKSGAAEIERLTEAQKKYEEER
ARLHQILVGSEIVQQKKKQLEHCQKASDLIRELEDALTSARTRVKKSQKKLQTAEEALSD
VRTTQHRLRTLYDMGSAARLAQTLQADTPCPVCGSLTHPSPAVHAEEIPSAQEMEVCMQH
VETAEKELQKCTAQAEQEKAACLRLEQELLHEQKRIKELLADETMEAFCARVAEREKQLR
RAQNACKALEKTYAEEQQQLFARKEQQKEQEALLQKNRNLIGLHEGEKNALERQLPEEYR
DAEAVRKAAALLEREVKTAETARAEAEKREKAAAQKCARTESAKAAAQRVLKEAEEVRQA
AQEAYTAAYCAADFLTEEEYHHAIVGDWAKSDYLEKVRERITAYDTAFQAAEELVKAAEA
AAEGLCPPDMEALTEAERIADQRVQDSARAQGVRMERKALYTRMTKEMDALERAGAARDK
RYRVIGKLANVAAAKPPYQIHFQTYVLRSILSDVIDAANERLMMMSRGRYRFIHGEGGQK
KKWWGLEIDVFDEYTGFPRLARTLSGGETFLASLSLALGLSDVVQHYAGGMHLDMIFIDE
GFGSLDSETLDVAIRALLDVQREGGRLVGIISHIEELRARIPVHLEVCRGQNGSYASFTQ
SGGLAL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgaaactccgcatccaggcgttcggttcctatgtggacgagcagattttg
gactttgagacagcccttgccgatgccccattccttttgatccatggagcgacgggctcc
ggaaagaccacgattttggacgcgatcgtattcgccctctacggagagtccagcggggat
atacgcgagggagcaatgctgcgttcctccacagcaccgccggatcgggcgacggaggtg
gagtatgtattcgcgctcgggcgccgccgctaccgtgtgctgcgttcaccggcctattct
cgcatgtcacgcggtaagatgacgcggcgggcagcaacgggacagctatttcgtctgccc
gatgttggcgagacgggcgaggaaaaactgcttgccgcgaacatcacggatgtctcggaa
cgcatcagtcagctgatcggcttcgatgccgaccagtttcgtcaggttgttctcctccca
cagggacagtttcagcggtttttgttggcagaagtcaaggatcgcagcgccattatgcag
cgtattttccgtacggaacggtatcagcgcattgaagaagcactgacgaaagaggcacag
cagcttgagcggacggcacaggcggagcgtgagcgcgcggaaggcattctgcgcgcagag
ggaatggcgtcatcggacgaactccgcacgcgtctctctgaactttcggaggagatacgc
cgtcaggacgaaatcttgcgggagcacgaaaaggtgcagaagagtgcacggcgggcacgt
gaagagggggctgctgcacagcagaaactcagtgcacgggatgcggcacaaagtgatttg
gaaaaaaagcgcgaacaggcagagtctgtccgcgactttcgtgtgcgcctgtcacgtgca
cagcgtgcacaaccggtgctctacaaggagcgcagctacatcgaagcgttgaacacggaa
cgcacccgcagagaggcatacgcatccgcagcagaggactgcgctgctgcgaagacggaa
catgatgcatccatagaatgcctaaagcaagtggaagcccatacagatgagcatacgaaa
aatgtagagcagctgcgccgcatgagggattacgaaccgctggcgagccgttaccaggaa
tgtacttctgccttgcgcgatcttcgcgtccgtgccgtagagggagaagaaaaatataaa
agcggcgcagcggagattgaacgtctcaccgaggcacagaagaagtacgaagaagaacgt
gcaagactgcatcagatcctggtcgggagtgagatcgttcagcagaagaagaaacagctt
gaacactgccaaaaggcgtcagacctgatacgtgaactagaagatgcactgacatcagca
cgcacacgtgtcaaaaaatcgcagaaaaaactgcagacggcagaggaggcattatccgac
gtgcggacgacgcagcaccgtctgcgcaccctctacgacatgggtagtgccgcacgtctg
gcgcagacactgcaggcagacacaccttgtccggtctgcggatctctcacacatccaagt
cctgccgtccatgcggaggagatcccgtccgcacaagagatggaggtatgcatgcagcat
gtggaaacagcagaaaaggagctgcagaaatgcactgctcaggcagagcaggaaaaggca
gcgtgccttcggcttgagcaggagcttctccatgagcaaaaacgcataaaagagcttctc
gcggatgaaaccatggaggcgttctgtgcgcgtgtcgcggaacgggaaaagcagcttcgc
cgtgcacagaatgcgtgcaaagcccttgagaaaacgtatgccgaagagcagcagcagctc
tttgcgcggaaggagcagcagaaagagcaggaagccctgcttcaaaagaatcgtaatctc
atagggcttcatgagggggagaagaatgcattggagcgtcagctgcccgaggagtatcgt
gatgcagaggcagtacgaaaagcggcggcacttctggaacgggaagtaaaaacagcggaa
accgcccgcgctgaagcagagaagcgtgagaaggcggcggcgcagaaatgtgctcgtacg
gagagtgctaaggcggcggcgcagcgcgttctgaaggaagcggaagaagtgcggcaagcg
gcgcaggaagcgtatacggctgcatattgtgcagcagattttctgaccgaggaagaatac
catcatgcgattgtgggagactgggcaaagagcgactatctggaaaaagtacgtgaacgt
atcaccgcgtatgatacggcgtttcaggcggcagaggagctggtgaaggcggccgaggca
gcagcagaggggctttgtccgccggacatggaggcactgaccgaagcggagcgcatcgcc
gatcagcgtgtgcaggacagcgcgcgagcacagggcgtccgcatggagcgcaaggctctc
tatacgcgcatgaccaaggaaatggatgcgctggaacgggcgggagcagcccgcgataag
cgttaccgtgtgatcgggaaactcgcgaatgtcgctgcagcaaaaccaccctatcagatc
cattttcagacctatgttcttcgctcgattctgtcggatgtcatcgatgccgcgaacgag
cggctgatgatgatgagccggggacgttaccgctttatccacggggagggcggacaaaag
aagaagtggtgggggcttgagatcgatgtctttgatgagtatacgggtttcccgcgtctc
gcacgcaccctctccggcggagagacattcctcgcctccctgtcactggcacttggactt
tcggacgttgtgcagcattatgcgggtggaatgcatctcgatatgattttcatcgacgaa
ggcttcggatctctggacagtgagacgcttgacgttgccattcgcgcgcttctcgatgtg
cagcgtgagggcggtcggctggttggcatcatttctcacatcgaggaactgcgtgcacgg
attcccgtccatctggaagtgtgccgcgggcagaacggcagctatgcatcctttacgcaa
agcgggggattggcattatga
DBGET
integrated database retrieval system
