Selenomonas sp. oral taxon 478: ADJ74_09010
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Entry
ADJ74_09010 CDS
T04017
Name
(GenBank) ATP-dependent deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sele
Selenomonas sp. oral taxon 478
Brite
KEGG Orthology (KO) [BR:
sele00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sele03400
]
ADJ74_09010
Enzymes [BR:
sele01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADJ74_09010
DNA repair and recombination proteins [BR:
sele03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ADJ74_09010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AKT54571
UniProt:
A0A0K1FJI1
LinkDB
All DBs
Position
1:1943645..1947241
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AA seq
1198 aa
AA seq
DB search
MTARLEFIIGRSGTGKTYDCLTAMKDVLREEPLGRQRILLVPEHMTYAAERALAEALTHG
AGFLQVYVFGFRRLARQVLLETGGEHLPRISDIGRRILLKDILLQHSRELSVFQRSVHKR
GFTEVLGHTIAELKRDRLSSDHLRQAADVSTGKHARLSAKLTELATIMDELAARMEGRLT
DHTDRMERLAAQLIDAPFLRGAELWVDGFDFFNPQELAVFRALFHVADTVHVSLTMDGRD
DGTHVFTNLPENIYDTGLFARSYQTMHLLQQIFTEEQPSAEIGIRLMPVQHRARTEGLRL
LEAQLFGHGHITPAKDDSIRIVEAANPRLEVETAAADILRLARDNGYRYREIAVLVRDVD
LYGDLLSLAFADCGIPFYLDVKRPSAHHPLAELLRAVAQMTWRGWAYETVFRALRTGFFP
LLGTEEDEDALPLCADWQEAVDRLENYCLAYGIRSESQWTATEPWDFVQRRVTEHELHLD
EEEERLREEQWLDHLRRRIAEPLSLLTGHLRRHESTARARTKALYDFLDELRVPQTLRLW
SETADREGRLADAAAHRQIWSSCMALFDQLVEVRGDDPLSSRDYEELLSDGLDAMSIALI
PPGLDHVTVASFDQNSIAGARAVFVIGANAGIMPRAGRTSGVFSDTELLFIGESLQTAGA
DSGHTVFGGRTQQSFLERYQLYRGFTEARDYLWVSYALSSVDGSTLAPSPLIARLRRISS
SFFSIPLALAGRDDPLLLSAPYPAFSHLTAALREKKERGEMPAMWGDVYNWMLQDAVMQP
LLRRMLHGLFLPPRERSIPAPVAARLFTRDHRLSGSTTRLETFRQCPFRHFAMYGLRLQQ
RDRYEFQSNDFGTLLHGILRGYGEWVRSAYGNDWCAALAEAPEKIEELLQELIPQVHSTV
LMSRASYRHRIERIRCTAQQTIQHLTSWAAASSFHPYGFEISFGRRNDGVRLADFPLADG
MTLSLRGQIDRLDVMDHHAYYLVLDYKTGATSLLLPEIRHGLKMQLLLYLFVVRSILDTE
EAFPAGMLYAPVKNPVVPCNVRLDEAALRRKVMEGMKLTGMLLDDADIMKQLDQAADHIC
ISFNKDNSLSKSSAKFVRSREEFQQLLAFLPQLIRATAEDILHGDIRVYPYRFQDRNACT
YCDYHTICTFDPALRQGDVYHDIADNAQEAMEEIARIVEEVNCDGGSADIHSRPTARD
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacggctggagtttatcattgggcggtcgggtacgggcaaaacatatgactgt
ctcacggcgatgaaggatgtgctgcgggaggagccgctcgggcgtcagcgtatccttctc
gttcctgagcacatgacctatgcggcggagcgggcactggccgaggctctgacgcatgga
gcgggattccttcaagtgtatgtctttgggtttcgtcgccttgctcggcaggtgttgctt
gagaccggcggggaacatctgccgcgcatcagcgatatcggcaggcgtattctgctcaag
gatattctgctgcagcacagcagagaactctccgtctttcagcgctccgtgcacaagcgt
gggtttacggaggtgctcgggcatacgatcgcagagctgaagcgtgatcggctcagctcc
gatcatctgcgtcaggcagcagatgtcagtacaggaaagcatgcacgactgtcagcgaag
ctgacagaacttgccacgatcatggacgaactcgctgcccgcatggagggacgactgacc
gatcacaccgatcggatggagcggctcgccgcacagctcattgatgcaccatttctgcgc
ggcgccgaactgtgggtggacggattcgattttttcaatccgcaggaacttgcagtattt
cgcgcgctgtttcacgttgctgataccgttcatgtcagcctgacgatggacggacgtgat
gatggaacgcatgtatttaccaatttgccggaaaatatctatgatacggggctgtttgcg
cgcagttatcagacgatgcacctcctgcagcagatctttacggaggagcagccatcggcg
gagattggaattcgactgatgccagtgcagcatcgggcgcggacggaggggcttcgtctg
ctggaagcacagctgttcggccacggacatatcacgcccgcgaaggatgattccatacgt
atcgtcgaggcagccaatccgcgtcttgaggtggagacggcggcggcagacatcctccgc
ctcgcacgcgacaatgggtatcgctaccgcgagatcgccgtgcttgtgcgtgatgtcgat
ctctacggcgatctgctctcacttgcttttgcggattgcggcattccattttatctggat
gtcaaacgcccgagtgcgcatcatccgcttgctgagctcctgcgtgctgttgcacagatg
acgtggcgtgggtgggcgtatgagactgtcttccgtgcgctgcgcacaggcttctttccg
ctgctcggaacggaggaggacgaagatgctcttccactctgtgcggattggcaggaggct
gtcgatcgtctggaaaactactgccttgcctacgggattcgcagtgaatcacagtggacg
gcgacagagccgtgggactttgtccagcggcgggtcacagaacatgagctgcatttggac
gaggaggaagaacgcctcagggaagagcagtggctggatcatctacgccgtcggattgca
gaaccgctttccctgctgaccgggcacctgcgacggcatgagagcacggcgcgtgcgcgt
acgaaggcactctacgacttcctcgatgagttacgtgttccgcagacactccgcctgtgg
agcgaaacggcagaccgggaaggtcgattggcggatgctgccgctcatcgccagatctgg
agttcctgcatggcactttttgatcagctggtcgaggtgcgcggagacgacccgctatcg
agtcgggactatgaggagctcttgagcgatggacttgacgccatgtccattgccctgatt
ccgccggggctggatcatgtcaccgttgcctcctttgatcagaacagcatcgcgggagcg
cgtgctgtttttgtcattggggcgaatgccggcatcatgccgcgagcgggaaggacgagt
ggcgtattttccgatacagagctcctcttcatcggtgagtctcttcagacagcgggagcg
gattccgggcataccgtctttggggggcgcacgcagcagagctttttggaacggtatcag
ctctaccgtggatttacggaggcacgcgactacctctgggtgtcgtatgcgctttcttcg
gtggatggttcgacccttgctccgtcgccgctgatcgcacggctgcgccgaatcagcagt
tcctttttctccatcccgcttgccttggctgggcgagatgatccgctgctcctctctgca
ccgtatcctgcattctcgcatttgactgctgcgctgcgtgaaaagaaagagcgcggggaa
atgcccgccatgtggggggatgtctacaactggatgctgcaggatgctgtgatgcagccg
ctcctgcggcgtatgctccatggactttttctcccgccgcgcgaacggtccatccctgct
cccgtggcagctcggctgtttacgcgcgaccataggctcagcggtagtaccacacggctg
gagacgtttcgccagtgcccgttccgccactttgctatgtacgggctgcggctgcagcag
cgggatcgctacgaatttcagagtaatgatttcgggacacttctgcacggcatcctgcgc
ggctacggtgagtgggtgcgcagtgcatacggcaacgattggtgcgcggcattggcagaa
gctccagagaagatcgaggaactactgcaggaactgatcccgcaggtgcacagtaccgtg
ctgatgagccgtgccagctatcggcaccgcatcgagcggatccgctgcacagcacaacag
accatacagcatcttacgtcatgggcggcggcatcttcttttcatccctatgggtttgag
atcagcttcgggcgcaggaatgacggcgtccgcctggcggattttccgctcgcggacggc
atgacgctctctctgcgcgggcagatcgaccgtttggacgtgatggatcatcatgcctac
tatctggttctcgactataaaacgggggcaacgtcccttctcctgcctgagattcggcac
ggcctgaagatgcagcttctcctgtatctcttcgtcgtgcgctccatcctggatacggag
gaggcgtttcccgcggggatgctctatgctccggtgaaaaatcccgttgtcccctgtaac
gtgcgcctggatgaagcagcgcttcggcgcaaggtaatggagggaatgaaactcacgggg
atgctgctcgacgatgcggatatcatgaagcagctcgatcaggcggcggatcatatctgc
atctcgttcaacaaagataacagtctctccaaatcctcggcaaaatttgtacgttcgcgc
gaggagtttcagcagcttcttgcctttttgccgcagttgatccgtgcgacggcggaggac
attctgcacggagatatccgcgtctatccctatcgctttcaggatcgtaatgcgtgtacg
tattgtgactatcatacgatttgcacgttcgatcctgcgctcaggcagggggacgtatac
cacgatatcgccgataatgcgcaggaggcgatggaagaaattgcacggatcgtagaggag
gtgaattgcgatggcggatcggctgacattcacagcagaccaacagcgcgcgattga
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integrated database retrieval system
