Selenomonas sp. TAMA-11512: TAMA11512_01570
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Entry
TAMA11512_01570 CDS
T10655
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm00260
Glycine, serine and threonine metabolism
selm00460
Cyanoamino acid metabolism
selm00630
Glyoxylate and dicarboxylate metabolism
selm00670
One carbon pool by folate
selm00680
Methane metabolism
selm01100
Metabolic pathways
selm01110
Biosynthesis of secondary metabolites
selm01120
Microbial metabolism in diverse environments
selm01200
Carbon metabolism
selm01230
Biosynthesis of amino acids
selm01240
Biosynthesis of cofactors
selm04981
Folate transport and metabolism
Module
selm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TAMA11512_01570
09102 Energy metabolism
00680 Methane metabolism
TAMA11512_01570
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TAMA11512_01570
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TAMA11512_01570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TAMA11512_01570
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TAMA11512_01570
Enzymes [BR:
selm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TAMA11512_01570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DUF5798
SprA-related
Motif
Other DBs
NCBI-ProteinID:
BEU86693
LinkDB
All DBs
Position
158663..159910
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AA seq
415 aa
AA seq
DB search
MNYVEEVTKYVRSCDDQVGAALEMELSRQRRNLELIASENVISPAVMMAMATTPANKYAE
GYPGKRYYGGCEDVDIIENIAIDRLKKLYGCEHANVQPHSGANANNAVYQALLKPGDTVM
GLNLAHGGHLTHGSPVNLSGILYHFVAYNVNDDGYLDYDAIRAKAKECRPKMIVAGASAY
PREIKFDVFADIAKEVGAYLFVDMAHIAGLVAAGLHQSPVPYADVVTTTTHKTLRGPRGG
VIMCREALAKDINKAIFPGTQGGPLMHIIAAKAVCFGEALKPEYKTYQEQVIKNAKALAD
AMMTEGFHLVSGGTDNHLMLVDLRNMNITGKELQNRLDEVYITLNKNAVPNDPESPFVTS
GVRIGTPAVTARGLKEDDMKIIAKQIRRTVTDFETAADDIRAAVTELCARYPLYK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaactatgtcgaggaagtcacgaagtatgtgcgatcatgcgatgatcaggtcggcgcg
gcgctggagatggagctttcacggcagcggcgcaatctcgagctgatcgcttcggagaac
gtcatcagtcccgccgtcatgatggcgatggctactacgcccgcgaacaagtacgcggag
ggatatcccggcaagcgctactacggcggctgcgaggatgtcgatatcatcgagaacatc
gcgatcgaccgattgaagaagctctacggctgcgagcatgccaacgtccagccgcactcg
ggcgccaacgcgaacaacgccgtctatcaggctctcctgaagcccggcgataccgtgatg
gggctcaacctcgcgcacggcggtcacctgacgcacggctcacccgtgaacctgtccggc
atcctgtatcatttcgtggcctacaacgtcaatgacgacggctatctcgactacgacgcc
atccgcgcaaaggcgaaggagtgcaggccgaagatgatcgtcgccggcgcgtccgcctat
ccgcgcgagatcaagttcgatgtcttcgccgacatagccaaggaagtcggtgcttacctc
ttcgtagacatggcgcacatcgcgggccttgtcgccgccggactccatcagagccccgtt
ccctacgccgatgtcgtcacgacgacgacgcacaagacgcttcgcggcccccgcggcggc
gtcatcatgtgcagggaggcgctcgcgaaggatatcaacaaggccatcttccccggcacg
cagggcggcccgctcatgcatatcatcgccgcaaaagccgtctgcttcggcgaagcgctc
aagcccgagtacaagacgtaccaggagcaggtcatcaaaaacgcgaaggcgcttgccgat
gctatgatgacggagggcttccatctcgtcagcggcggcacggacaatcacctcatgctc
gtcgatctgcggaatatgaacattacgggcaaggagctccagaaccgcctcgatgaagtc
tacatcacattgaataagaacgccgtcccgaacgatccggaaagcccgttcgtcacgagc
ggtgtccgcatcggaacgccggccgtcacggcgcgcggactgaaggaagacgacatgaag
atcatcgcgaagcagatccgccggacagtcacggactttgagacagcggcggacgatatc
cgcgctgcggtcaccgagctctgcgcgaggtatccgctgtacaagtga
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