Selenomonas sp. TAMA-11512: TAMA11512_03420
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Entry
TAMA11512_03420 CDS
T10655
Name
(GenBank) DEAD/DEAH box helicase
Organism
selm Selenomonas sp. TAMA-11512
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
SWIM
SWI2_SNF2
AAA_14
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BEU86878
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Position
356207..359491
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AA seq
1094 aa
AA seq
DB search
MLKDITIRALTRNDGSWQRGCRYYRTGAVTSLREEALSHSWRAKVHGTEVYDVQVELNDR
DTGVREYACDCPAASLYPGACKHVVAVLKAVQAELEKREGAEEDKEEDDPYALVRKIEKM
HSRISGGSDIARFLTCLSNTRVEDARQAPIVLTPTLYYAKNYGRTDVWVEFLIGRGKNYV
LRNVRDFLQSMQGQQEIVFGKQLTIDPRTARFRAGVSAELWRLLCDTYADERWGMSYSHY
AQRCFNDRRLELNDRGVMEKFFRIFLEAGEPLTYMDVRGDGDTRAIEVREGVPEMVMRLG
KSRGGATLRIDPEDLHPLGRGAQFIFANDVIHIVPKEALPQYETMLEAFRGKGKISVQEE
ELPVFFERVLPYLKKFAPVEIPDFFLERFATPALTAQAYFDYYREGIEARLVFLYGDIRF
DPLREEPPERNDRGRQLIRDKAAEDRVLAIFHAYGFALEGDRLRQPGEEAAYDFLSEGMT
ALEEVAEIYYGEAFREKPIRSMPPLTFGVSVGEGNLLEVKLKTEEIDFAAMAEILTSYRQ
QKKYYRLPDGGFLSLKDAALEGISDFIESVKPKKGQEGDTLRLSPALAPYLDSVAKEEGG
LRLEKDRAVKALIRDLRSPSDADIEVPKPLRPILRDYQATGFAWLSILARHGLGGILADD
MGLGKTIQVLAFLLAVRDGAAPPSLVVAPTSLLYNWPAEAERFTPDLAVRIVHGTKRERE
AALTDTAGVDLIITTYHTLRRDVELYEKQRFRYVFLDEAQQIKNPGTQAARAVKRLAAEG
GFALTGTPIENHLAELWSIFDFLLPGYLGSPTQFKGRFEMPIVRGEDERAARNLRRAIRP
FILRRMKRDVLTELPDKVEREMTNEMTEAQKKVYQAFMIQAKKEYRSILKEHGLGEQRIK
ILALLTRMRQIACDPALFMDEYQGGSGKLDQLVEIVTDAVEAGHRILIFSQFTKMLGRIA
GRLEALSVDCSYLDGQTKPETRLQLVKDFNAGGDPVFLISLKAGGTGLNLTGADMVIHCD
PWWNPAVEEQATDRAYRLGQKNNVQVIKLVTKDTVEEKIFELQKRKKALIDRMIQPGESF
LGKITDDELEGLFM
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaaagatataacgattcgcgcgctgacacgaaatgacggatcatggcagcgcggc
tgccgttattaccgcacaggggcggtgacatctctgcgcgaggaggctctttcgcacagt
tggcgggcgaaggtgcacggaacggaggtctatgacgtacaggtcgagctcaatgaccgt
gatacgggagtccgggagtatgcctgtgactgcccggcggcatccctgtatccgggcgcg
tgcaagcacgtggtggcagtcttgaaggccgtgcaggcggagctcgaaaagcgggaggga
gcggaagaggacaaagaggaagatgatccgtacgcgctcgtccgaaagatagagaagatg
cacagccgcatcagcggagggtcggacatcgcacgctttttgacttgcctgtccaatacg
cgcgtcgaggatgcgcggcaggcgccgatcgtcctgacacccacgctgtactatgcaaaa
aactacggcaggaccgacgtctgggtggagtttctcatcggacggggcaagaactacgtc
ctgcgcaatgtgcgcgattttctgcagagcatgcagggacagcaggagattgtcttcggc
aagcagctgacgatcgaccccaggacggcgcgctttcgagccggggtgtccgcggagctg
tggcggctgctctgcgacacgtacgccgatgaacggtggggcatgtcgtacagccactac
gcgcagcgctgctttaacgatcgccgcctcgagctgaatgacagaggcgtcatggagaag
ttcttccgcatttttctggaggcgggcgaaccgctcacctatatggatgtgcgcggggac
ggggatacgcgggcaatcgaggtgcgcgagggcgttccggagatggtgatgcgcctgggg
aaatcacgcgggggagcgacgctccgcatcgacccggaggatctgcatccgctcggccgg
ggcgcgcagttcatcttcgcgaatgatgtcatccacatcgtgccgaaggaggccctgccg
cagtatgagacgatgctggaagcgttccgggggaaggggaagatctccgttcaggaggag
gagctgcccgtcttcttcgagcgcgttttgccgtatctgaagaaattcgcgcctgtcgag
attccggacttctttctcgagcggttcgccacgccggcgctcacggcgcaggcgtatttt
gactactatcgggagggcattgaagcgcgcctcgtatttctctacggcgatatccgcttt
gatccgctgcgcgaggagccgccggagagaaacgatcgcggcagacagctcatccgcgac
aaagcggcggaggatcgcgtcctcgccatcttccatgcctacggcttcgcgctggaaggt
gatcgtctgcgccagccgggagaagaggcggcgtacgattttctctcggaggggatgacg
gcgctggaggaggtcgccgagatctactacggggaggcgttccgtgagaagccgatccga
tcgatgccgcccctgacgttcggcgtctcggttggtgagggcaatctcctcgaggtgaag
ctgaagacggaggagatcgactttgcggcgatggcggagattctgacctcgtaccgtcag
cagaagaagtattatcgtctgcccgacggcggattcctctctctcaaggatgcggcgctg
gagggcatctcggactttattgaaagcgtcaagccgaaaaaagggcaggagggagatacg
ctgcggctgtcgcctgcgctcgctccctatctggacagcgtcgcgaaggaggaaggcgga
cttcgcctcgagaaggatcgggcggtcaaggcgctcatacgcgacctgcgaagcccgtcg
gacgcggacatcgaagtgccgaagccgcttcgtccgatcctgcgcgactatcaggcgacg
gggttcgcgtggctatcgatcctcgcgaggcacggtctgggcggcattcttgccgacgat
atgggcctgggcaagacgatacaggtactggcattcctgcttgccgtgcgggatggagcc
gcgcctccgtcccttgtcgtcgcgccgacctcactcctgtacaactggccggcggaggcg
gagcgctttacgcccgatcttgccgtgcgcatcgtgcacggcacgaagcgcgagcgggag
gcggcgctcaccgatacggcgggcgtggatctcatcatcacgacgtatcacacgctgcgc
cgggatgtcgagctgtatgagaagcagcggttccgctatgtgttcctcgatgaggcgcag
cagataaaaaatccgggcacgcaggccgcgcgtgctgtgaagcgcctcgctgccgagggc
ggtttcgcgctgacgggcacgccgatcgagaaccacctcgccgagctctggtcgattttt
gactttttgctgccggggtatctcggcagcccaacacagttcaagggacggtttgagatg
cccatcgtgcgcggcgaagacgagcgcgcggcgaggaatctgcgccgggcaatccgccct
ttcatcctgcgccgcatgaagagggatgtcctgaccgagcttcccgacaaggtcgagcgc
gagatgacaaatgagatgacagaggcgcagaagaaagtctatcaggcgtttatgatacag
gcgaagaaggagtatcgaagtatcctcaaagagcacggactcggggagcagcgcataaag
attctcgcgctcctgacaagaatgcgtcagattgcctgcgatcccgcgctcttcatggac
gagtatcagggcggatcggggaagctcgaccagctcgtcgagatcgtcaccgatgccgtg
gaggcgggacaccgcatactgatcttctcacagttcacgaagatgctcgggcgcattgcg
gggcgtctcgaggcgctctcggtggactgctcgtacctcgacggacagacgaagcccgag
acgcggctgcagctcgtcaaggacttcaacgcgggaggcgatcccgtcttcctcatctcg
ctgaaggcgggcggcacggggctcaacctcacgggcgcggacatggtcatccactgcgat
ccgtggtggaatcccgccgtcgaggagcaggcgacggaccgcgcctatcggctcgggcag
aagaacaatgtgcaggtcatcaagcttgtcacgaaggataccgtggaggagaagatcttc
gagctgcagaagcgcaaaaaggcgctcatcgaccgcatgattcagcccggcgagagcttt
ctcggcaagatcacggacgacgaactcgaagggctgtttatgtag
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