KEGG   Selenomonas sp. TAMA-11512: TAMA11512_11980
Entry
TAMA11512_11980   CDS       T10655                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
selm  Selenomonas sp. TAMA-11512
Pathway
selm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:selm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TAMA11512_11980 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:selm03400]
    TAMA11512_11980 (ruvB)
Enzymes [BR:selm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TAMA11512_11980 (ruvB)
DNA repair and recombination proteins [BR:selm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     TAMA11512_11980 (ruvB)
    RecFOR pathway proteins
     TAMA11512_11980 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase AAA_22 DUF815 AAA_14 NB-ARC Rad17 nSTAND3 TsaE AAA_3 NTPase_1 AAA_18 RNA_helicase IstB_IS21 bpMoxR AAA_24 Sigma54_activ_2 AAA_33 AAA_17 AAA_28 ABC_tran NPHP3_N NACHT AAA_25
Other DBs
NCBI-ProteinID: BEU87734
LinkDB
Position
1263407..1264423
AA seq 338 aa
MEDMMEFESRIMMTEEQQADGWQYSLRPRKLAEYIGQDKVKENMKVYVQAAVSRREALDH
VLLYGPPGLGKTTLAGIIANELGVNLRVTSGPAIERSGDLAALLTNLGERDVLFIDEIHR
LSHSVEEVLYSAMEDFALDIIIGKGPSARSIRLDIAPFTLIGATTKAGALASPLRDRFGV
IERLEYYQPESLVFIIKRAAEIMNIAIEERGAIEIARRSRGTPRIANRLLKRVRDFAQIE
GDGAITDAIADRALSRLEVDKAGLDRTDRRLLEAMIKKFSGGPVGLDTMAASISEESDTI
EDVYEPYLMQLGFLQRTPRGRVATEAAYRHLGIPCKEV
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggaagacatgatggagttcgaaagtcgcattatgatgacggaagaacagcaggcagat
ggctggcagtatagtctgcggcccagaaaacttgccgaatacatcgggcaggataaggtt
aaagaaaatatgaaagtctatgtgcaggcggcggtctctcgcagggaagccctcgatcat
gtactcctttacggacctccgggtttgggcaaaacaacgcttgccggtattattgccaat
gagctgggcgtcaaccttcgagtgacttccggacctgccatcgaacgatcgggagatctt
gctgcgcttttgaccaatctcggcgagagggatgtcctcttcattgatgaaattcatcgc
ctttcgcatagcgtggaagaagtactgtactcggcgatggaggacttcgctctcgatatt
atcatcggcaaaggaccgagtgcccgttcgattcgacttgatattgcaccgtttacgtta
atcggtgcgacaacgaaggctggcgcgcttgcatctcctttgcgcgatcgcttcggtgtc
attgaacggctggaatactatcagccggaatcactggtatttattatcaaacgtgcagcg
gagattatgaatattgcgattgaagagcgcggagcaatcgagatcgctcgacgttctcgc
ggtacgccgcgcattgccaatcgactcctaaagcgcgttcgggactttgcgcagattgag
ggagacggagccattacggatgcgattgcggatcgagcgttaagtcgtctcgaagtggat
aaagcgggacttgatcgtacagatcgtcgtctcctggaagcgatgatcaaaaagttttcc
ggagggcctgtcggtctcgatacgatggcggcatctatcagtgaggagtcagatacgatt
gaagatgtttacgagccgtatctcatgcagctcggttttctgcagaggacgcctcgcggg
cgtgtggctacggaggcggcgtatcggcatctgggcattccctgtaaggaggtatga

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