Selenomonas sp. TAMA-11512: TAMA11512_11980
Help
Entry
TAMA11512_11980 CDS
T10655
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TAMA11512_11980 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
selm03400
]
TAMA11512_11980 (ruvB)
Enzymes [BR:
selm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TAMA11512_11980 (ruvB)
DNA repair and recombination proteins [BR:
selm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TAMA11512_11980 (ruvB)
RecFOR pathway proteins
TAMA11512_11980 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
AAA_22
DUF815
AAA_14
NB-ARC
Rad17
nSTAND3
TsaE
AAA_3
NTPase_1
AAA_18
RNA_helicase
IstB_IS21
bpMoxR
AAA_24
Sigma54_activ_2
AAA_33
AAA_17
AAA_28
ABC_tran
NPHP3_N
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BEU87734
LinkDB
All DBs
Position
1263407..1264423
Genome browser
AA seq
338 aa
AA seq
DB search
MEDMMEFESRIMMTEEQQADGWQYSLRPRKLAEYIGQDKVKENMKVYVQAAVSRREALDH
VLLYGPPGLGKTTLAGIIANELGVNLRVTSGPAIERSGDLAALLTNLGERDVLFIDEIHR
LSHSVEEVLYSAMEDFALDIIIGKGPSARSIRLDIAPFTLIGATTKAGALASPLRDRFGV
IERLEYYQPESLVFIIKRAAEIMNIAIEERGAIEIARRSRGTPRIANRLLKRVRDFAQIE
GDGAITDAIADRALSRLEVDKAGLDRTDRRLLEAMIKKFSGGPVGLDTMAASISEESDTI
EDVYEPYLMQLGFLQRTPRGRVATEAAYRHLGIPCKEV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatgatggagttcgaaagtcgcattatgatgacggaagaacagcaggcagat
ggctggcagtatagtctgcggcccagaaaacttgccgaatacatcgggcaggataaggtt
aaagaaaatatgaaagtctatgtgcaggcggcggtctctcgcagggaagccctcgatcat
gtactcctttacggacctccgggtttgggcaaaacaacgcttgccggtattattgccaat
gagctgggcgtcaaccttcgagtgacttccggacctgccatcgaacgatcgggagatctt
gctgcgcttttgaccaatctcggcgagagggatgtcctcttcattgatgaaattcatcgc
ctttcgcatagcgtggaagaagtactgtactcggcgatggaggacttcgctctcgatatt
atcatcggcaaaggaccgagtgcccgttcgattcgacttgatattgcaccgtttacgtta
atcggtgcgacaacgaaggctggcgcgcttgcatctcctttgcgcgatcgcttcggtgtc
attgaacggctggaatactatcagccggaatcactggtatttattatcaaacgtgcagcg
gagattatgaatattgcgattgaagagcgcggagcaatcgagatcgctcgacgttctcgc
ggtacgccgcgcattgccaatcgactcctaaagcgcgttcgggactttgcgcagattgag
ggagacggagccattacggatgcgattgcggatcgagcgttaagtcgtctcgaagtggat
aaagcgggacttgatcgtacagatcgtcgtctcctggaagcgatgatcaaaaagttttcc
ggagggcctgtcggtctcgatacgatggcggcatctatcagtgaggagtcagatacgatt
gaagatgtttacgagccgtatctcatgcagctcggttttctgcagaggacgcctcgcggg
cgtgtggctacggaggcggcgtatcggcatctgggcattccctgtaaggaggtatga
DBGET
integrated database retrieval system