Selenomonas sp. TAMA-11512: TAMA11512_12510
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Entry
TAMA11512_12510 CDS
T10655
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm03420
Nucleotide excision repair
selm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TAMA11512_12510 (pcrA)
03430 Mismatch repair
TAMA11512_12510 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
selm03400
]
TAMA11512_12510 (pcrA)
Enzymes [BR:
selm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TAMA11512_12510 (pcrA)
DNA repair and recombination proteins [BR:
selm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TAMA11512_12510 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TAMA11512_12510 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BEU87787
LinkDB
All DBs
Position
1321084..1323504
Genome browser
AA seq
806 aa
AA seq
DB search
MDIFQGLNKEQQDAVMHMNGPLLIMAGAGSGKTKVLTCRIANLLAHGVPPWAILAITFTN
KAAAEMRERVDNMIGSPAKDVWLSTFHSFCARFLRREIERLGIYKSNFVIYDTADSKTVI
KNCLKEVNLDEKQYPPNSIQAAISNAKNLLQSPKEMARIAGSFHESKVAELYALYNKKLS
ANNALDFDDLLLVSVMLLEQDQEVRERYQHRFQYILVDEYQDTNGAQYQLTRLLTSKHQN
LCVVGDADQSIYGWRGADSSNILNFEKDFPNARTIKLEQNYRSTKMILSAANALIENNHD
RKPKNLWTENPEGERLTYYEAMDERDEARFITDTIVTEKNTKHRKYGDIAVLYRTNAQSR
VLEEAMMTAGIPYTMVGGLKFYDRMEIKDILAYLRVIFNPADAVSLLRIINVPKRGIGNT
TIAKIAAHAAENGLSLFDVISSPDTLAEIKVSTRARNQLDTFTSLLFRFIGQAGTSSVSA
LVSGILEESGYTADLEQQDTPEAETRLENLQEFVGVAKEFEKSEENPTLEDFLGQVALVS
DIDTADLEEERVTLMTLHAAKGLEFPVVFMAGLEEGIFPHARTLLAPSEIEEERRTCYVG
ITRAEEKLYISRARYRMLYGKGNAYPPSRFLGEIPSTYMEQAQSIDFFENTALRQKQSTH
SLHGFESRASLQSMPQIQYTVQTENQSRQIFSPQSALAALQEIQLKKTAANSGSSISDGR
MISLSGGAATLSSAKGGAPRAAFAAIKPDTAGEVNWNVGDKARHGKWGIGTVVEVRGNGE
EAELRIAFPNMGIKALMKKYAPIQKV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
ttggatatatttcagggactaaataaggaacagcaagatgctgtaatgcatatgaacggt
cctctgcttattatggcaggtgcaggttccggaaaaacgaaggtcttgacctgccgtatt
gccaatctgttggcacacggagtacctccttgggcaatcctggccatcacgttcacgaat
aaggcagctgccgagatgcgtgaacgtgtagataatatgatcggctcgccggcaaaggat
gtatggttgagtacatttcactccttttgcgcccggtttttacgaagagaaattgagcgg
ctggggatatataaaagcaatttcgttatctatgatacggcagattctaaaacagtcata
aaaaactgcttaaaggaagtcaacctggatgaaaaacagtacccgcccaatagcatacag
gcagctatctcgaatgcaaagaacctgctgcaaagtcccaaagaaatggcgaggattgcc
ggcagctttcatgagagcaaggtagcagagctatatgcgctttataataaaaaattgagt
gctaataatgcattggattttgatgatttgcttcttgtttctgtaatgctgttagagcaa
gatcaagaggtgcgtgaacggtatcagcatcgattccaatacatactcgtcgatgagtat
caggatacgaatggggcgcagtatcaactaactcgactgttgacttctaaacatcaaaat
ctctgtgttgttggtgatgccgatcagtcgatctatggctggcgtggtgcggatagcagt
aatatcctgaactttgaaaaggatttcccaaatgcgcgaacgattaagctggagcaaaac
tatcgttcaacaaaaatgattttaagcgcagcaaacgccttgattgagaataaccacgac
cgaaagccgaaaaatctgtggacggaaaacccggaaggtgaacgactgacctattacgaa
gcaatggatgagcgtgatgaggctcgatttatcacagatacaattgtcacagaaaagaat
acaaagcacaggaagtacggagatatcgctgttctttaccgtacaaacgcacagtctcgt
gtgcttgaagaagcgatgatgacagcagggattccctacacaatggttggcggactgaag
ttctatgatcgtatggaaatcaaggatatacttgcctatctgcgtgtaatcttcaatccg
gcggatgcagtcagtctcttgcgcattatcaatgtaccaaagcgaggcatcggtaatacg
acgatagccaaaattgctgcacacgccgcagaaaacggactcagcctatttgatgtcata
tccagtcccgatacgcttgcagaaattaaggtatcaacacgtgctcgaaatcagctggat
acatttacctccttgctttttcggtttatcggacaggccgggacgtcatccgtctctgca
cttgtgtccggtattttggaagagtccggctatacagcagatctagaacagcaagatacg
ccagaggcggagacgcgcttggaaaacttacaggaatttgtcggtgtggcgaaggagttt
gaaaagagcgaagaaaacccgacattggaggatttcctcggacaggtggcgcttgtatcg
gatattgatacagcggatttggaggaagaacgagttactctgatgacgcttcatgcagca
aagggattggaatttcctgttgtctttatggccggtttggaggaggggatttttcctcat
gccagaacgcttttagccccttcagaaatagaagaagagcgtcgtacctgctatgtggga
atcacgcgggcagaagaaaaactatatatttctcgtgctcgctatcgtatgctctatggc
aagggaaacgcctatccgccgtctcgttttctcggcgaaataccgtcaacgtatatggag
caagcacaaagcatagactttttcgagaatactgcgctaagacagaaacaaagtacacat
tctctccatggatttgaaagccgtgcttccttgcaatccatgccacaaatacaatatacg
gtacaaacggaaaatcaaagtcgtcaaatcttttcgccgcagtctgcacttgccgcatta
caggagatacaattaaaaaagacggcagccaatagcggcagctctatttctgacggaagg
atgatttcactctcaggaggtgcggcaactttgtcttctgctaaaggtggcgctcctcgc
gcggcttttgccgcaatcaaacctgatacggcgggagaggtcaactggaatgttggagat
aaggctcgccatgggaaatgggggattggtactgtcgttgaggttcgtggcaatggagag
gaagctgagcttcgtatcgcgttcccaaatatgggtatcaaagctttgatgaaaaaatat
gcacctattcaaaaggtataa
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