Selenomonas sp. TAMA-11512: TAMA11512_14170
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Entry
TAMA11512_14170 CDS
T10655
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
selm Selenomonas sp. TAMA-11512
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
selm03032
]
TAMA11512_14170
03036 Chromosome and associated proteins [BR:
selm03036
]
TAMA11512_14170
03400 DNA repair and recombination proteins [BR:
selm03400
]
TAMA11512_14170
DNA replication proteins [BR:
selm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TAMA11512_14170
Chromosome and associated proteins [BR:
selm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TAMA11512_14170
DNA repair and recombination proteins [BR:
selm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TAMA11512_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
DUF2780
DUF3924
Motif
Other DBs
NCBI-ProteinID:
BEU87953
LinkDB
All DBs
Position
complement(1494941..1495219)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKTELVAKVAEKAGLTKKDAEKALGAVIESIQQALVKKDKVQLIGFGTFEVKARAARTG
RNPQTGKEIKIPASKNPVFKAGKALKDAVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaacggaattagtggctaaagttgccgaaaaggcggggcttacaaagaaggat
gcagagaaggctttaggtgcagtgattgaaagcattcagcaggctcttgttaagaaggac
aaggttcagctcatcggctttggcacctttgaagtcaaggctcgtgctgcacgcactggc
cgcaatccgcagacgggtaaggaaatcaagattcctgcttccaaaaatcctgtgttcaaa
gccggtaaggctctgaaggatgctgtaaacaagaaataa
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