Selenomonas sp. TAMA-11512: TAMA11512_14570
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Entry
TAMA11512_14570 CDS
T10655
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
selm Selenomonas sp. TAMA-11512
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
selm03009
]
TAMA11512_14570 (rimO)
Enzymes [BR:
selm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TAMA11512_14570 (rimO)
Ribosome biogenesis [BR:
selm03009
]
Prokaryotic type
ribosomal protein modification factors
TAMA11512_14570 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BEU87993
LinkDB
All DBs
Position
complement(1546165..1547499)
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AA seq
444 aa
AA seq
DB search
MLKAGFISLGCAKNLVDTEVMLGILKENEVEITADPSEADIIIVNTCGFIQSAKEESITT
ILNMAEYKETGCCRSLIIAGCLGQRYGEELLQDIPEANAILGTGTWDRIMEAVEETLKGN
RVLITDEKCLLYNAKTPRIQTTPSYSAYVKIAEGCDHSCAFCAIPLIRGPYKSRAIEDIK
DEVANLAAHGVREFNLIAQDTTYYGKDLYGEPALVRLLRELVRVAGVEWIRILYSYPRNY
TDELIELVRTEPKICKYVDLPLQHAHDAMLRSMRRPDTQAEIKALLRKLRERIPGVVIRS
TFIVGFPGETDAQYQTLRNFIETERFDKLGVFTYSHEENTPAYSMTTQVAEDIMQERFHD
LMSLQSKISEELNQSMEGKVLDVLVEGRNEDLAYGRSYREAPEIDGQIFIENDMKSSIGS
IVPVRILQGFTYDAVGERMDEGIT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagcaggtttcatcagcctcgggtgtgcgaagaatctggtcgataccgaggtc
atgctgggcatattgaaggaaaatgaagtcgagattacagcggatccgagtgaagcggat
atcatcattgtcaatacatgcggatttatccagtcggcaaaggaggagtccatcaccacc
attttaaatatggcggagtacaaggagacgggatgctgtcggtcgctcatcattgccgga
tgtcttggacaacgctatggtgaggagcttctgcaggatatcccggaggcgaatgccatt
ctcgggacgggaacatgggatcgaatcatggaggcagtcgaggagacactcaagggaaat
cgtgttctcatcacggatgaaaaatgtcttctctataatgcgaaaacaccgcgtatacag
acgacgccttcttattcagcgtatgtcaagattgcggagggatgtgatcacagttgcgct
ttttgcgccatcccgttgatacgcggcccttataagagccgtgcgatagaggatatcaaa
gacgaggtggcaaatcttgccgcccacggtgtacgagagttcaatctcattgcacaggac
acaacctactatgggaaagatctttatggagagcctgctttagtacgccttcttcgcgag
cttgtgcgcgttgcaggtgtggagtggattcgtattctctacagctatccgaggaattat
acggatgagcttattgagcttgtccgcaccgaaccgaagatctgcaaatatgtcgacctg
cctctgcagcatgcacatgatgcgatgttgagaagcatgcgccgtccggatacgcaggcg
gagatcaaggcgctcttaaggaagctgcgcgagcgtattccgggggttgtaattcgatct
acctttattgtcgggttccccggagagacggatgcacagtatcagacactgcgtaatttc
atcgagacggagcgctttgataagctgggtgtatttacatattcacacgaagagaatacc
cctgcctacagtatgacgacacaagttgctgaggatatcatgcaggaacgcttccatgat
cttatgagtctgcagtcgaagatatcggaagagctcaatcaatccatggaggggaaggtt
cttgatgtcttagtcgaagggcgtaatgaggatcttgcctacggacgctcataccgagaa
gcgccggagatcgatggtcagattttcattgaaaacgatatgaagagctcgatcgggtca
attgtaccggtgcgcattctgcaagggtttacatacgatgccgttggggagcgtatggat
gagggaatcacatga
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