Selenomonas sp. TAMA-11512: TAMA11512_14700
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Entry
TAMA11512_14700 CDS
T10655
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm03030
DNA replication
selm03410
Base excision repair
selm03420
Nucleotide excision repair
selm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TAMA11512_14700 (polA)
03410 Base excision repair
TAMA11512_14700 (polA)
03420 Nucleotide excision repair
TAMA11512_14700 (polA)
03440 Homologous recombination
TAMA11512_14700 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
selm03032
]
TAMA11512_14700 (polA)
03400 DNA repair and recombination proteins [BR:
selm03400
]
TAMA11512_14700 (polA)
Enzymes [BR:
selm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TAMA11512_14700 (polA)
DNA replication proteins [BR:
selm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TAMA11512_14700 (polA)
DNA repair and recombination proteins [BR:
selm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TAMA11512_14700 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TAMA11512_14700 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BEU88006
LinkDB
All DBs
Position
complement(1564270..1566891)
Genome browser
AA seq
873 aa
AA seq
DB search
MKKRFLVIDGSSLMYRAFFALPLLSTSTGIFTNAVFGFSKMLGKLLEEYKPDFMAVALDK
GRKTFRNAMYEAYKGTRKPTPAELSSQFALLQDYLQVAGIQVLEEENYEADDILGSLAKR
AAAEGMEAYIVTGDRDALQLIGDNVSVLFTKKGISNIVCYDEAVFEAEYGLKPMQLIDVK
GLMGDTSDNIPGVPGIGQKTAIKLLQDYVSVEGVYAHLEEISGKKLKENLTENKDKALLS
KSLATIRADMALSVAPADCRITPQKSELLAFYHTMEMKVPVDPFFPYIEETSGEMAAENH
GTATSFMGPKSIQTGGVKEALFQSVKKTGSVVFCAAFKGQVPEISIEKLCVASDEIAAIA
EAEDIKELHPLIEDEEITKIVFDLKTLLHAGISIHKNVFSIDLAAYLLEPSAASYTAEEL
AATYLNGRAFDVNSQLQATALAETASIGLALYPILKEKLEVQGLEEIYRMIELPLVPVLA
EMEENGIYLDPVALKAETAAVNQEVITIQKRIYDVAGEGFNPNSPKQMREFLFDRLGIIP
PPGTPKTKSGYSTNAEVLESIRNAHPIIDEILSYRFWTKLKSTYLDSMPALISPSTHRIH
TRLNQTVTATGRLSSSEPNLQNIPVRTEAGRKIRSLFKPGEGYDCLLSADYSQIELRILA
HLSEDENFLYAFTHEEDIHARTAAEVFGVPMEEVTGELRRRAKAVNFGIIYGISDFGLSR
DLQIPRSDAARYIESYFAKCKGVKNFIDRIVEEAHQKGYVTTLFGRRRDLPSIHSKNFNQ
RSLAERMAMNTPIQGAAADIIKLAMIKVSAEMKKHAFKSRILLQVHDELVIEAIDSEVEA
VTEVVRKAMETVAELRVPLKVDVHIGKDWAEAK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagagatttttagttattgatggaagcagcctgatgtatcgggcgttcttcgcc
ttgccgctcttgtcaacttcgacggggatttttaccaatgccgtgtttggattcagtaag
atgctcggcaagctgttagaggaatataagcctgattttatggctgttgctttggataaa
ggcagaaagactttccgaaatgctatgtatgaggcgtataagggaacgagaaagcctacg
cctgccgagctttcttctcagtttgcactcctgcaggactacctgcaggtcgcgggcatt
caggtgctggaagaggagaactatgaagcggatgatatccttgggtcgcttgctaagcgc
gcagcggccgaggggatggaggcctatatcgtcacgggagaccgcgatgcacttcagctt
atcggagataatgtatcggtgctgttcacgaaaaagggaatttcgaatatcgtctgctat
gatgaggctgtatttgaggcggaatatggcctaaagcccatgcaactcattgatgttaag
ggattgatgggagatacctcggataatattcccggtgttccgggcattggtcagaagaca
gcaatcaagctgctgcaagactatgtatctgtcgagggggtatacgcgcacttagaggaa
atttccggcaagaagctgaaggaaaacctgacagagaacaaggataaggcgctgctgtca
aagagcttggcgacgattcgagccgatatggctctctccgtagctccggcagattgccgc
attacgccccaaaaatcggaattgctggcgttttatcatacaatggaaatgaaggttccc
gtggatcccttctttccgtatatagaagaaacgagcggagaaatggcagcggagaatcat
ggtactgcgacgtctttcatgggaccgaaatcgattcaaacaggcggggttaaggaagcg
cttttccaatccgtgaaaaagaccggaagcgttgttttctgtgccgcttttaagggacag
gtcccagagatttccatcgagaagctttgcgtcgcttcggatgaaattgccgccattgca
gaggcagaggatatcaaggagctacatcctctcatagaggatgaagagattacaaagatt
gtctttgatttaaagacgcttctgcacgccggcataagcatccataagaatgtcttttca
attgatttggcagcctatctcttagagccgagcgctgcgtcgtacacggcagaggagctc
gccgcgacatatctcaatggacgcgcattcgatgtgaattcgcaattgcaggcgactgcc
ttagcggagacggcatctatcgggctggcactctatcccatcctgaaagagaagctggaa
gtgcagggcttggaagaaatctacagaatgattgagctgcctctggttcccgtgcttgcg
gagatggaagagaacggcatatatctcgatccggtcgcattgaaggcagagaccgcggcg
gtaaatcaagaggtcatcaccatacagaaacgtatctatgacgtggcaggagagggattc
aatccgaattcgccaaagcagatgcgggagttcctctttgatcgactggggattataccg
ccgcccgggacgccgaagacgaagagcggctactcgacgaacgcagaagtgctggagagt
atacgcaatgcgcatcccatcattgacgagattctatcctatcgcttttggacgaagctc
aagtcaacgtatttggacagtatgccggctttgatttcgccgtccacgcatcgcatacac
acacgactgaatcagacggtaacggcgacggggagactgtccagctcagagccgaactta
caaaatattcctgtccgaaccgaagccgggcgcaagattcgctctcttttcaagcccgga
gagggatatgactgcttattgtctgcagactattcacagattgagctgcgcatcctggcc
catctgtctgaggatgagaatttcctctatgctttcacgcatgaggaagacatccacgcg
cgtacagcggcagaggtttttggcgttcccatggaagaagtcacgggagagctcagacga
cgcgctaaggctgtcaattttgggattatctacggcatcagcgatttcggactatcgagg
gatttgcagatacctcgttcggatgctgcgagatatatcgagagttactttgctaagtgc
aaaggtgttaagaacttcattgatcgcatcgtggaggaggcgcatcaaaaaggctatgtc
acaacgctctttggccgccgcagagatctcccctctatccacagcaagaatttcaatcag
aggtcgcttgctgaacgcatggcgatgaatacgccgatacagggagcagccgcggatatc
atcaaattggcaatgattaaggtctctgcggagatgaagaagcatgcgttcaagagccgc
atccttctgcaagtgcatgatgagcttgtcattgaggcaatcgacagcgaagtcgaagcc
gtcacagaggtcgttcggaaagccatggaaaccgttgcggagcttcgggttccactgaaa
gtggatgtgcatatagggaaggactgggcagaggcaaaatga
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