Selenomonas sp. TAMA-11512: TAMA11512_18070
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Entry
TAMA11512_18070 CDS
T10655
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm00300
Lysine biosynthesis
selm00470
D-Amino acid metabolism
selm01100
Metabolic pathways
selm01110
Biosynthesis of secondary metabolites
selm01120
Microbial metabolism in diverse environments
selm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TAMA11512_18070 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TAMA11512_18070 (dapF)
Enzymes [BR:
selm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
TAMA11512_18070 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
BT_MCC_alpha
Motif
Other DBs
NCBI-ProteinID:
BEU88343
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Position
complement(1893305..1894156)
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AA seq
283 aa
AA seq
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MAFQFTKWHGCGNDFVMVNAFQEDMSAYEKDLPALVRRACDRHFGIGGDGLILVRPSETA
DFRMHYFNADGTEAEMCGNGIRCLGGVVHRDRLTEAQGFTVETGAGILVLKLVETDENRI
VACVDMGEPILDAPEIPIMGYGDERVVERELRVASEVFRMTGVSMGNPHAVIFREDAETL
PLALWGPAVERHETFPRKTNVEFVKVIDRERIRMRVWERGAGITLACGTGTCAAVVAGVL
TGRTERETDVEVDGGTIRVKWDADDNHVYMTGPAECVFTGVFA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcagtttacaaagtggcacggctgcggcaatgattttgtcatggtcaatgcg
tttcaagaggacatgtcggcgtatgaaaaggacttgcctgcactcgtacgccgcgcgtgt
gaccgtcatttcggcatcggcggcgacggattgatcctcgtccgtccgtcggagacggcc
gattttcgcatgcattacttcaacgcggacggtacggaagcggagatgtgcggaaacggc
atccgctgcctgggcggtgtcgttcatcgggacagactgaccgaggcacaagggtttacc
gtggaaacgggagcggggatccttgtcctgaaactcgtcgagacggatgagaatcggatt
gtcgcctgcgtcgatatgggcgagccgatcctcgacgccccggaaattcccatcatgggc
tacggtgatgaacgggtcgtcgagcgtgagctgcgagtcgccagtgaagtatttcggatg
acgggcgtctccatgggcaacccgcatgccgtcatcttccgggaagacgcagagacactg
ccgcttgcactttggggacctgccgttgaaaggcatgagacattcccgagaaagacgaac
gtcgagttcgttaaggtcatcgaccgggagaggatacgcatgcgcgtctgggagcgcggt
gcgggcatcacacttgcctgcggaacggggacgtgcgcggccgttgtcgccggcgtgctt
acaggacgtacggagagggagacggatgtcgaggtcgatggcggcaccatccgcgtcaag
tgggatgcggacgacaatcacgtctatatgacggggcccgctgaatgtgtgtttacgggt
gtattcgcataa
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