Selenomonas sp. TAMA-11512: TAMA11512_20570
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Entry
TAMA11512_20570 CDS
T10655
Name
(GenBank) response regulator transcription factor
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm02020
Two-component system
selm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TAMA11512_20570
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TAMA11512_20570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
selm02022
]
TAMA11512_20570
Two-component system [BR:
selm02022
]
NarL family
DegS-DegU (multicellular behavior control)
TAMA11512_20570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_30
HTH_40
Peripla_BP_4
HTH_10
DUF1601
HTH_11
C1-set
HTH_38
Plk4_PB1
Motif
Other DBs
NCBI-ProteinID:
BEU88593
LinkDB
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Position
complement(2175491..2176162)
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AA seq
223 aa
AA seq
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MAIKILIADDHALVRQGVKRVLNFEDDLEVIGEAEDGQEALARTLVLQPDILLLDLNLPG
LGGLEVANQLQAAKSKTKIVVLTIHDSDNYVLELLKNGALGYLLKDVEPSMLIRAIHVVN
EGNAFVYPKLAERLFGGVSENENLKDRAAQMWRESRSERLTSREMDVLSCIAKGFSNQDI
AQALFVSEKTVKNHLTNIFRKLNVNDRTQALIYVLKHKIMTLE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcaattaaaattctaatcgcagacgatcacgcacttgtgcgtcaaggtgttaagcgt
gtactgaactttgaggatgatctcgaggtcatcggagaagcggaagacggacaggaggcg
cttgcacgcacactcgtcttacagccggatatccttctgctcgatctcaatctcccggga
ctcggcgggctggaagtcgccaaccagctgcaggcggccaagtcgaagacaaagatcgtc
gtcctcacgattcacgacagcgacaactatgtccttgaacttttgaagaacggcgcgctc
ggttacctcttgaaggatgtcgaaccgtccatgctcattcgcgcgattcacgttgtcaac
gagggcaacgcattcgtctatccgaagcttgccgagcgtcttttcggcggcgtcagcgag
aatgaaaacctcaaggatcgcgccgcgcagatgtggcgtgaaagccggtcggagcgtctg
acctcgcgtgaaatggatgttctttcctgtatcgcgaagggcttctccaaccaggatatc
gcacaggcgctctttgtcagcgagaagacggtcaagaaccatctgacgaacatcttccgg
aagctcaacgtaaatgaccgcacgcaggcgctcatttacgttctgaaacataaaatcatg
acgcttgaataa
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